RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 HBEGFQ99075 208 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DLL3Q9NYJ7 618 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FTSJ1Q9UET6 329 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ADGRE2Q9UHX3 823 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DOLKQ9UPQ8 538 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SDK1Q7Z5N4 2213 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SLC30A4O14863 429 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ZBTB11O95625 1053 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 EPHA3P29320 983 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 RORAP35398 523 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 FRKP42685 505 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 HMGCS1Q01581 520 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 C16orf72Q14CZ0 275 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 PLCL1Q15111 1095 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CEBPEQ15744 281 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 MPEG1Q2M385 716 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SPRED3Q2MJR0 410 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 MANEAQ5SRI9 462 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 KHDRBS2Q5VWX1 349 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM198Q66K66 360 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SCIMPQ6UWF3 145 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 COX15Q7KZN9 410 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CAMKMTQ7Z624 323 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 RAB42Q8N4Z0 105 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 AGR3Q8TD06 166 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 NUDT8Q8WV74 236 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ZFYVE21Q9BQ24 234 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 MACROD1Q9BQ69 325 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 AIF1LQ9BQI0 150 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SNX6Q9UNH7 406 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 RUVBL1Q9Y265 456 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ASB4Q9Y574 426 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 TNRC6AQ8NDV7 1962 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 GSAPA4D1B5 854 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 EEDO75530 441 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 RFPL3O75679 317 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 T-ENOLP0DO92 83 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 FGF5P12034 268 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 TACR1P25103 407 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ALDH4A1P30038 563 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CLDN6P56747 220 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 HSD11B2P80365 405 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CBX1P83916 185 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 EMX2Q04743 252 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 TRA2AQ13595 282 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 PDCD2Q16342 344 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 DEPDC1Q5TB30 811 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 TREML1Q86YW5 311 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 PLXDC1Q8IUK5 500 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 KIRREL3Q8IZU9 778 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 KCT2Q8NC54 265 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 METTL6Q8TCB7 284 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 DYDC1Q8WWB3 177 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 UCN3Q969E3 161 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ZDHHC12Q96GR4 267 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 LIN37Q96GY3 246 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ZNF764Q96H86 408 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 MTERF1Q99551 399 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SORBS1Q9BX66 1292 aaKnown RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 KLHL25Q9H0H3 589 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 ACTR8Q9H981 624 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SAR1AQ9NR31 198 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SDR39U1Q9NRG7 319 aaPredicted RBP6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 CUL9Q8IWT3 2517 aa6.43□□□□□ -1.38
LINC00517-202ENST00000554257 SLC28A1O00337 649 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 GIPC1O14908 333 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TMPRSS11DO60235 418 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SCN2BO60939 215 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SKAP2O75563 359 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SDC1P18827 310 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 PTPN6P29350 595 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 DUSP3P51452 185 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 WNT3P56703 355 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 PHC1P78364 1004 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CAMK2BQ13554 666 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NAA25Q14CX7 972 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SPDYAQ5MJ70 313 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ZCCHC7Q8N3Z6 543 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SLC38A9Q8NBW4 561 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NETO1Q8TDF5 533 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NCSTNQ92542 709 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 THOC1Q96FV9 657 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CDC6Q99741 560 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ELAC2Q9BQ52 826 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SLC22A11Q9NSA0 550 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 OCIAD1Q9NX40 245 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NCDNQ9UBB6 729 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ADAM29Q9UKF5 820 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 COPG1Q9Y678 874 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SPTBP11277 2137 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 KNL1Q8NG31 2342 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TBX19O60806 448 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ULK1O75385 1050 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 B3GALT4O96024 378 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TSFMP43897 325 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 DIO3P55073 304 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ERVK-8P63133 956 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms