RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR4F6Q8NGB9 312 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 C9orf43Q8TAL5 461 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 CREB3L4Q8TEY5 395 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 TCEAL3Q969E4 200 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 SCMH1Q96GD3 660 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 HRASLS5Q96KN8 279 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 CSPG4P5Q96PW8 444 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 KCNA7Q96RP8 456 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 MGLLQ99685 303 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 KCNJ15Q99712 375 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 MAGEB5Q9BZ81 275 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PPP1R3EQ9H7J1 279 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 NT5DC2Q9H857 520 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 ARNT2Q9HBZ2 717 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 HHATLQ9HCP6 504 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 DNAJC11Q9NVH1 559 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
SIX4-202ENST00000554079 USP3Q9Y6I4 520 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 A0A0G2JMZ2 1700 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 LRRC37A2A6NM11 1700 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 LRRC37AA6NMS7 1700 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 GBF1Q92538 1859 aa9.23□□□□□ -0.93
SIX4-202ENST00000554079 ZNF646O15015 1829 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 LACTBL1A8MY62 500 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 M0R233 179 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 WRBO00258 174 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 DHX15O43143 795 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 ADAMTS4O75173 837 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 VPS4BO75351 444 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 POP7O75817 140 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 PRAMEF1O95521 474 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 VIPP01282 170 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CYP17A1P05093 508 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SLC2A2P11168 524 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 HPGDP15428 266 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 S100PP25815 95 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ITGB7P26010 798 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 ASPAP45381 313 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ALDH9A1P49189 494 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 GMPSP49915 693 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 HNMTP50135 292 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 P2RY4P51582 365 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CAPZA1P52907 286 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 IFRD2Q12894 506 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 NPRL3Q12980 569 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SERTAD2Q14140 314 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ZNF628Q5EBL2 1059 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ZNF648Q5T619 568 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 CD276Q5ZPR3 534 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 KCTD11Q693B1 232 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SLC25A25Q6KCM7 469 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 NOTUMQ6P988 496 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 GCNT7Q6ZNI0 430 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MOB2Q70IA6 237 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 UXS1Q8NBZ7 420 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 KCTD15Q96SI1 283 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 H2AFJQ9BTM1 129 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 TMEM43Q9BTV4 400 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 GABARAPL3Q9BY60 117 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CPEB1Q9BZB8 566 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 SEMA4CQ9C0C4 833 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 EVA1AQ9H8M9 152 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 AMBNQ9NP70 447 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 KRT84Q9NSB2 600 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ZIM2Q9NZV7 527 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ING1Q9UK53 422 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 PCDHGA2Q9Y5H1 932 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SGK494L7N484 410 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 ARNTLO00327 626 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CD3EAPO15446 510 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 GRAP2O75791 330 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 APOC3P02656 99 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 FBP1P09467 338 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CNPP09543 421 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 NCF1P14598 390 aaPredicted RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 CXCL3P19876 107 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 DNASE1P24855 282 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 TSPAN7P41732 249 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MATKP42679 507 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CRYBB2P43320 205 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 NUDT6P53370 316 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 NFKB2Q00653 900 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 DSC2Q02487 901 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 CTBP1Q13363 440 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MADCAM1Q13477 382 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 PWP1Q13610 501 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SNAPC1Q16533 368 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 PFKFB4Q16877 469 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 MICBQ29980 383 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SPDYE7PQ495Y7 208 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 C4orf46Q504U0 113 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 XKR9Q5GH70 373 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 SPOUT1Q5T280 376 aaKnown RBP9.22□□□□□ -0.93
SIX4-202ENST00000554079 FAM171A1Q5VUB5 890 aa9.22□□□□□ -0.93
SIX4-202ENST00000554079 FAHD1Q6P587 224 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms