RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CTSVO60911 334 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 STK16O75716 305 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SLU7O95391 586 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SERPIND1P05546 499 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SNRPAP09012 282 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 RBP1P09455 135 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 CDH1P12830 882 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 GFAPP14136 432 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 NPPBP16860 134 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 GNAZP19086 355 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FBLP22087 321 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 HPDP32754 393 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 RGS1Q08116 209 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 ACAP2Q15057 778 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 RBBP5Q15291 538 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 TGFBIQ15582 683 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 PPP1R3AQ16821 1122 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 PAGE2BQ5JRK9 111 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FRMPD2BQ6IN97 320 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF425Q6IV72 752 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 NIPAL1Q6NVV3 410 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FBXO42Q6P3S6 717 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 TMPRSS11BQ86T26 416 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 ASPGQ86U10 573 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 LRRC56Q8IYG6 542 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SPATA6LQ8N4H0 392 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 CELF2-AS1Q8N7Q2 184 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 UBLCP1Q8WVY7 318 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 APOBEC4Q8WW27 367 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SLC13A3Q8WWT9 602 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FKBP10Q96AY3 582 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 MTBPQ96DY7 904 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 MVB12AQ96EY5 273 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 GBP5Q96PP8 586 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FUT8Q9BYC5 575 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SOX17Q9H6I2 414 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 PELI2Q9HAT8 420 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 ACSS2Q9NR19 701 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 STARD5Q9NSY2 213 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF180Q9UJW8 692 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 TCFL5Q9UL49 500 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 PTRH2Q9Y3E5 179 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 MRPS18BQ9Y676 258 aaKnown RBP7.95□□□□□ -1.14
PSEN1-209ENST00000553855 SPEGQ15772 3267 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 KCNE1BA0A087WTH5 132 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 LOC105369274A0A096LPK9 316 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 LOC102723532A0A0G2JNH3 316 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TRBC2A0A5B9 178 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 FITM1A5D6W6 292 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MKRN2OSH3BPM6 223 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RIPK2O43353 540 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 KLHL41O60662 606 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 KERAO60938 352 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SMIM24O75264 130 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ATE1O95260 518 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ALBP02768 609 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 C2P06681 752 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SLC35E2BP0CK96 405 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 COL6A2P12110 1019 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ECHS1P30084 290 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 OTX2P32243 289 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MAP2K3P46734 347 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RRADP55042 308 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RPS18P62269 152 aaKnown RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 CYP4F2P78329 520 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 CSNK1G2P78368 415 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 CDC16Q13042 620 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 LAPTM5Q13571 262 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SSPNQ14714 243 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SLC9A5Q14940 896 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TBR1Q16650 682 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 PDK4Q16654 411 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 UGT8Q16880 541 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 IRAK1BP1Q5VVH5 260 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 OVCH1Q7RTY7 1134 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 LRRC70Q7Z2Q7 622 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 PLD3Q8IV08 490 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 OR4N4Q8N0Y3 316 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MFSD9Q8NBP5 474 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SLC38A9Q8NBW4 561 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TRPV3Q8NET8 790 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ABHD11Q8NFV4 315 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TTLQ8NG68 377 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 KCTD4Q8WVF5 259 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 EXTL1Q92935 676 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 PTERQ96BW5 349 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RHBDF1Q96CC6 855 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 NXNL1Q96CM4 212 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MMABQ96EY8 250 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 UBXN10Q96LJ8 280 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF285Q96NJ3 590 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 OR2A5Q96R48 311 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 DRC3Q9H069 523 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ADNPQ9H2P0 1102 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms