RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 RUVBL1Q9Y265 456 aaKnown RBP17.19■□□□□ 0.34
PSEN1-208ENST00000553719 PCDHB3Q9Y5E6 796 aa17.19■□□□□ 0.34
PSEN1-208ENST00000553719 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
PSEN1-208ENST00000553719 ANKDD1BA6NHY2 528 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 MAGEB17A8MXT2 336 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 TXNDC9O14530 226 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 ZSCAN9O15535 394 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-208ENST00000553719 ETHE1O95571 254 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 KRT6AP02538 564 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 KRT6BP04259 564 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 SLC35G6P0C7Q6 338 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 JMJD7P0C870 316 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 PCNAP12004 261 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 SERPINB3P29508 390 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 HMOX2P30519 316 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 HNRNPH1P31943 449 aaKnown RBP17.18■□□□□ 0.34
PSEN1-208ENST00000553719 KRT6CP48668 564 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 FOXC1Q12948 553 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 ABRAXAS2Q15018 415 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 TLDC1Q6P9B6 456 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 AFAP1L2Q8N4X5 818 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 KCT2Q8NC54 265 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 TAAR9Q96RI9 348 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 MTERF1Q99551 399 aaKnown RBP17.18■□□□□ 0.34
PSEN1-208ENST00000553719 CTRCQ99895 268 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 SPRY4Q9C004 299 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 NRSN2Q9GZP1 204 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 ILKAPQ9H0C8 392 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-208ENST00000553719 ELOVL6Q9H5J4 265 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 POLR1BQ9H9Y6 1135 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 BRF2Q9HAW0 419 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 SERTAD3Q9UJW9 196 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 MRPS2Q9Y399 296 aaKnown RBP17.18■□□□□ 0.34
PSEN1-208ENST00000553719 CCL27Q9Y4X3 112 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 B3GALT1Q9Y5Z6 326 aa17.18■□□□□ 0.34
PSEN1-208ENST00000553719 CEP295Q9C0D2 2601 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 LRIT2A6NDA9 550 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 C9orf172C9J069 976 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 ULK1O75385 1050 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 DXOO77932 396 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 EIF2S1P05198 315 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 SMIM10L1P0DMW3 83 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 HSD3B1P14060 373 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 HSD3B2P26439 372 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 RPL14P50914 215 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 RPS13P62277 151 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 CSTF3Q12996 717 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 IFT88Q13099 833 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 GRM7Q14831 915 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 RTP5Q14D33 572 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 PRAMEF17Q5VTA0 474 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 YOD1Q5VVQ6 348 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 GARNL3Q5VVW2 1013 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 CEACAM20Q6UY09 585 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 TRIM46Q7Z4K8 759 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 HOMEZQ8IX15 550 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 KIRREL3Q8IZU9 778 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 ZNF655Q8N720 491 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 AGR3Q8TD06 166 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 TWIST2Q8WVJ9 160 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 SELENOMQ8WWX9 145 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 N4BP2L2Q92802 583 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 MS4A6EQ96DS6 147 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 SMIM10Q96HG1 83 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 TEFMQ96QE5 360 aaKnown RBP17.17■□□□□ 0.34
PSEN1-208ENST00000553719 HBEGFQ99075 208 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 ZPBPQ9BS86 351 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 KLHL31Q9H511 634 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 PNPOQ9NVS9 261 aa17.17■□□□□ 0.34
PSEN1-208ENST00000553719 CDRT15L2A8MXV6 281 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 NPIPB8E9PQR5 432 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ZNF749O43361 778 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 JUNP05412 331 aaKnown RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ADRB1P08588 477 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 MAPK10P53779 464 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 GABREP78334 506 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 RGS1Q08116 209 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 CUL3Q13618 768 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 DDX39BQ13838 428 aaKnown RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 XKR7Q5GH72 579 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 DCAF12Q5T6F0 453 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 KHDRBS2Q5VWX1 349 aaKnown RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ZNF385CQ66K41 422 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 TTC19Q6DKK2 380 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 RHBDD2Q6NTF9 364 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 UBE3DQ7Z6J8 389 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 GPR135Q8IZ08 494 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 SLC38A9Q8NBW4 561 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 UTP15Q8TED0 518 aaKnown RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 MTFMTQ96DP5 389 aaKnown RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 CMTM7Q96FZ5 175 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 SLC46A1Q96NT5 459 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 SCNM1Q9BWG6 230 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-208ENST00000553719 NLNQ9BYT8 704 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ACPTQ9BZG2 426 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 ASCL3Q9NQ33 180 aa17.16■□□□□ 0.34
PSEN1-208ENST00000553719 FOXJ2Q9P0K8 574 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms