RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PAGE2BQ5JRK9 111 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SH2D4BQ5SQS7 431 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 METTL21CQ5VZV1 264 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SLC30A9Q6PML9 568 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 GPRIN3Q6ZVF9 776 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 GOLGA7Q7Z5G4 137 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 C17orf64Q86WR6 236 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 NRROSQ86YC3 692 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SLC22A18ASQ8N1D0 253 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 KRT78Q8N1N4 520 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 LILRA3Q8N6C8 439 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 OR5AR1Q8NGP9 310 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 OR2L8Q8NGY9 312 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 HMGCLL1Q8TB92 370 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 MAPK15Q8TD08 544 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF473Q8WTR7 871 aaKnown RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF480Q8WV37 535 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 LCN9Q8WX39 176 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 STON2Q8WXE9 905 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 DLG3Q92796 817 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 PTCD3Q96EY7 689 aaKnown RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 MED8Q96G25 268 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 PDXPQ96GD0 296 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 RMDN2Q96LZ7 410 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 RILPQ96NA2 401 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF382Q96SR6 550 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ELF4Q99607 663 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 EFCAB11Q9BUY7 163 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ATG10Q9H0Y0 220 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SRMSQ9H3Y6 488 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 EHD1Q9H4M9 534 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 NT5DC2Q9H857 520 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 NOL11Q9H8H0 719 aaKnown RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 UCK1Q9HA47 277 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 CAPN10Q9HC96 672 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SLCO1B3Q9NPD5 702 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SEMA4BQ9NPR2 832 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM184CQ9NVA4 438 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 INTS7Q9NVH2 962 aaKnown RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 RIC8BQ9NVN3 520 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 OR6C2Q9NZP2 312 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-202ENST00000553619 CHD7Q9P2D1 2997 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 TBC1D29Q9UFV1 150 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 TRPS1Q9UHF7 1281 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 ZDHHC2Q9UIJ5 367 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 PCTPQ9UKL6 214 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 IKZF3Q9UKT9 509 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 PCDHB10Q9UN67 800 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 SLC22A14Q9Y267 594 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 PLEKHM1Q9Y4G2 1056 aa4.83□□□□□ -1.64
VTI1B-202ENST00000553619 A0A0G2JND7 137 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 A0A1B0GTQ1 180 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ZC3H12DA2A288 527 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PIPSLA2A3N6 862 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 RHPN2P1A8MT19 583 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 C2orf74A8MZ97 194 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ISM1B1AKI9 464 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SCAMP1O15126 338 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 YY2O15391 372 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 RGS14O43566 566 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 DIAPH2O60879 1101 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 LYPLA1O75608 230 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 OR4F21O95013 312 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SLC16A8O95907 504 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 CFIP05156 583 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ERGP11308 486 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 JUPP14923 745 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 NPPBP16860 134 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AMD1P17707 334 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 GSTM2P28161 218 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ADSLP30566 484 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SERPINB1P30740 379 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 GDF5P43026 501 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AGTR2P50052 363 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 DUSP3P51452 185 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ATXN3P54252 364 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AQP5P55064 265 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 HHEXQ03014 270 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PRDX1Q06830 199 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 IFT88Q13099 833 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 CHIT1Q13231 466 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 C1orf61Q13536 156 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 KIR2DS3Q14952 304 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SF1Q15637 639 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 IMPG1Q17R60 797 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 KIF19Q2TAC6 998 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SMU1Q2TAY7 513 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 INAVAQ3KP66 663 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 GGTA1PQ4G0N0 100 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF542PQ5EBM4 170 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 XKR6Q5GH73 641 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PRAMEF14Q5SWL7 426 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 TPRG1LQ5T0D9 272 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ATG9BQ674R7 924 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 GRHL2Q6ISB3 625 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms