RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 HADHBP55084 474 aaKnown RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 UBASH3AP57075 661 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF33BQ06732 778 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TFF3Q07654 80 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TUBA3CQ13748 450 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 POU6F1Q14863 301 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CCSMST1Q4G0I0 132 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 KRTCAP3Q53RY4 240 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ABHD17BQ5VST6 288 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 H3F3CQ6NXT2 135 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TUBA3EQ6PEY2 450 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CDKL3Q8IVW4 592 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 BEST3Q8N1M1 668 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 MARVELD2Q8N4S9 558 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 OR2A1Q8NGT9 310 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 SUN3Q8TAQ9 357 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 AGAP11Q8TF27 550 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 STYXQ8WUJ0 223 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 MVB12AQ96EY5 273 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 FAM118BQ9BPY3 351 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ZFYVE21Q9BQ24 234 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TUBB6Q9BUF5 446 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 RAB11FIP5Q9BXF6 653 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 HEMGNQ9BXL5 484 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 CXXC4Q9H2H0 198 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 MKKSQ9NPJ1 570 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 PIH1D1Q9NWS0 290 aaKnown RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 TRPC4Q9UBN4 977 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 RUVBL1Q9Y265 456 aaKnown RBP6.87□□□□□ -1.31
ATXN3-219ENST00000553488 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
ATXN3-219ENST00000553488 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ARHGAP21Q5T5U3 1957 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 EML6Q6ZMW3 1958 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 IGKV1-8A0A0C4DH67 115 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 IQCF5A8MTL0 148 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 NPIPA5E9PKD4 350 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 E9PLN8 166 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 FAM227AF5H4B4 570 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 H0YGG7 62 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 P2RX6O15547 441 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 AKR1B10O60218 316 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 SLCO2B1O94956 709 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 MBD3O95983 291 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 RPN2P04844 631 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 HEXBP07686 556 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 UQCRHP07919 91 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 RBP3P10745 1247 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ERGP11308 486 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CD99P14209 185 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 AOAHP28039 575 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 DNAJA1P31689 397 aaKnown RBP6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ARF3P61204 181 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-219ENST00000553488 AP2B1P63010 937 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 HSF1Q00613 529 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ALDH6A1Q02252 535 aaKnown RBP6.86□□□□□ -1.31
ATXN3-219ENST00000553488 HSPA14Q0VDF9 509 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 PRPSAP1Q14558 356 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 SEMA3AQ14563 771 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 SYT16Q17RD7 645 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 HKDC1Q2TB90 917 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ACER2Q5QJU3 275 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 FCRLBQ6BAA4 426 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 PLAG1Q6DJT9 500 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 C3P1Q6ZMU1 363 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 LANCL3Q6ZV70 420 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF534Q76KX8 674 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 LUZP1Q86V48 1076 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 PAQR7Q86WK9 346 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 DOLPP1Q86YN1 238 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CREG2Q8IUH2 290 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CRLF3Q8IUI8 442 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CCDC50Q8IVM0 306 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 RCOR2Q8IZ40 523 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CFAP61Q8NHU2 1237 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 NRGNQ92686 78 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 SDCCAG3Q96C92 435 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 PPP1R2P1Q96PQ5 205 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 CHP1Q99653 195 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 VKORC1Q9BQB6 163 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 VN1R1Q9GZP7 353 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 DLL4Q9NR61 685 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 STMN3Q9NZ72 180 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 TEKT2Q9UIF3 430 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 DUSP13Q9UII6 198 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 NPIPA1Q9UND3 350 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 RUVBL2Q9Y230 463 aaKnown RBP6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ALG6Q9Y672 507 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 NFS1Q9Y697 457 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 COL6A5A8TX70 2615 aa6.86□□□□□ -1.31
ATXN3-219ENST00000553488 ATRQ13535 2644 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 MPDZO75970 2070 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 A0A0A6YYC8 382 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 IGHV3-20A0A0C4DH32 117 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 MACROD2A1Z1Q3 448 aa6.85□□□□□ -1.31
ATXN3-219ENST00000553488 I3L1I5 382 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-219ENST00000553488 TTI1O43156 1089 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms