RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 LOC102723996A0A087X1L8 192 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 IGKV1-8A0A0C4DH67 115 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 E7ENX8 843 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 H0YIG0 161 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GOLGA8MH3BSY2 632 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 SGK494L7N484 410 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 EIF1AYO14602 144 aaKnown RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 FOXS1O43638 330 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 NRDCO43847 1150 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 KIF5CO60282 957 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 AVILO75366 819 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 RDH16O75452 317 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CDC123O75794 336 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 NSA2O95478 260 aaKnown RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CYC1P08574 325 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 F7P08709 466 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ARNTP27540 789 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 SLC1A2P43004 574 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CLCN7P51798 805 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 TAP2Q03519 686 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CTBP1Q13363 440 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GBX1Q14549 363 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ABRAXAS2Q15018 415 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 OR1C1Q15619 314 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ACER2Q5QJU3 275 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF324BQ6AW86 544 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 PLAG1Q6DJT9 500 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF425Q6IV72 752 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 LRRC8EQ6NSJ5 796 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 UGT3A1Q6NUS8 523 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 DRICH1Q6PGQ1 229 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 TMEM205Q6UW68 189 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 PIWIL4Q7Z3Z4 852 aaKnown RBP9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ASPGQ86U10 573 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CPNE9Q8IYJ1 553 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 EID3Q8N140 333 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 MYO1HQ8N1T3 1032 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 PSMF1Q92530 271 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 KCNJ9Q92806 393 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 CYTH2Q99418 400 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 LPAR4Q99677 370 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GPR21Q99679 349 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 FAM167BQ9BTA0 163 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 TMEM184CQ9NVA4 438 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 GALPQ9UBC7 116 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 ITGB1BP2Q9UKP3 347 aa9.36□□□□□ -0.91
ACTN1-208ENST00000553370 PDZD2O15018 2839 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 A0A1W2PQ72 361 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 TCRBV7S3A2A0A539 114 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF860A6NHJ4 632 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 SDR42E2A6NKP2 422 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 NPIPA5E9PKD4 350 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 KRT14P02533 472 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 HIST1H2AGP0C0S8 130 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CCDC175P0C221 793 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 HIST1H2ADP20671 130 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CCND1P24385 295 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 MST1P26927 711 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 IMPA1P29218 277 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CDC25BP30305 580 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CXCR5P32302 372 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 OR4D2P58180 307 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 AKAP6Q13023 2319 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 NSDHLQ15738 373 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 SFT2D3Q587I9 215 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 PAPD4Q6PIY7 484 aaKnown RBP9.35□□□□□ -0.91
ACTN1-208ENST00000553370 XKRXQ6PP77 449 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CENPUQ71F23 418 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 PRSS41Q7RTY9 318 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 ANKRD37Q7Z713 158 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CRLF3Q8IUI8 442 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 DENND6AQ8IWF6 608 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 FBXO15Q8NCQ5 510 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-208ENST00000553370 CHTF18Q8WVB6 975 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 SLC13A3Q8WWT9 602 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 TMEM125Q96AQ2 219 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 PEX11GQ96HA9 241 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 HIST1H2AHQ96KK5 128 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 HIST1H2AJQ99878 128 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 MACROD1Q9BQ69 325 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 TINAGQ9UJW2 476 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 NPIPA1Q9UND3 350 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 NAALAD2Q9Y3Q0 740 aa9.35□□□□□ -0.91
ACTN1-208ENST00000553370 MAP1AP78559 2803 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-208ENST00000553370 MTORP42345 2549 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 FBN2P35556 2912 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 FAM237BA0A1B0GVD1 139 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 FEZF1A0PJY2 475 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 MAGEB16A2A368 324 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 GABRR3A8MPY1 467 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
ACTN1-208ENST00000553370 PSMD12O00232 456 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-208ENST00000553370 NDC80O14777 642 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms