RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RFC1P35251 1148 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 UGT1A5P35504 534 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ACTN2P35609 894 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 NUDT1P36639 197 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PRCPP42785 496 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MATR3P43243 847 aaKnown RBP eCLIP2.31□□□□□ -2.043e-7■■■■□ 23.1
CPSF6-207ENST00000551516 CCR10P46092 362 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 NDUFA8P51970 172 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 UCNP55089 124 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TMPRSS3P57727 454 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MC1RQ01726 317 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ID2Q02363 134 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ADIGQ0VDE8 80 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 BST2Q10589 180 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RALGDSQ12967 914 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CHAF1BQ13112 559 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CUL2Q13617 745 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FRG1Q14331 258 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 C16orf72Q14CZ0 275 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MED22Q15528 200 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 DLG2Q15700 870 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 IGFBP7Q16270 282 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 WSCD2Q2TBF2 565 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SYTL3Q4VX76 610 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF542PQ5EBM4 170 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ENTPD8Q5MY95 495 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MFSD4BQ5TF39 518 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PAPD7Q5XG87 772 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 KRT39Q6A163 491 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM154Q6P9G4 183 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 KLHL35Q6PF15 583 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SARM1Q6SZW1 724 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF782Q6ZMW2 699 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF517Q6ZMY9 492 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 Q6ZSR6 202 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 INTS8Q75QN2 995 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TIPARPQ7Z3E1 657 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RD3Q7Z3Z2 195 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SERPINA11Q86U17 422 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TBC1D26Q86UD7 250 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 GGNQ86UU5 652 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CACUL1Q86Y37 369 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 DDIASQ8IXT1 998 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ZDHHC23Q8IYP9 409 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RBFAQ8N0V3 343 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TAGAPQ8N103 731 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 LSMEM2Q8N112 164 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 GALNT16Q8N428 558 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SLC25A41Q8N5S1 370 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 IQUBQ8NA54 791 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FAM184AQ8NB25 1140 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ACBD4Q8NC06 268 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 C1orf131Q8NDD1 294 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FBXL13Q8NEE6 735 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 OR4N2Q8NGD1 307 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RASSF8Q8NHQ8 419 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 UBA3Q8TBC4 463 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CREB3L4Q8TEY5 395 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 WIPF2Q8TF74 440 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 DDI1Q8WTU0 396 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF606Q8WXB4 792 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SNX21Q969T3 373 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 DHX58Q96C10 678 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RNF183Q96D59 192 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ECHDC3Q96DC8 303 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 C1orf74Q96LT6 269 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SPAG5Q96R06 1193 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CCNL2Q96S94 520 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SYT11Q9BT88 431 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC61Q9BV99 259 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MAGEF1Q9HAY2 307 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PDFQ9HBH1 243 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FZD3Q9NPG1 666 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PNRC2Q9NPJ4 139 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 GDF3Q9NR23 364 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ABCC13Q9NSE7 274 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PIGVQ9NUD9 493 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM45AQ9NWC5 275 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 NCKIPSDQ9NZQ3 722 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 HSPB7Q9UBY9 170 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TBC1D29Q9UFV1 150 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 POLG2Q9UHN1 485 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RASAL2Q9UJF2 1139 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 HAO1Q9UJM8 370 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ING1Q9UK53 422 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 KIAA1257Q9ULG3 409 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PLA2G4CQ9UP65 541 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM5Q9Y2B1 443 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CARD8Q9Y2G2 431 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RAP2CQ9Y3L5 183 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MFHAS1Q9Y4C4 1052 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PCYT1BQ9Y5K3 369 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SNX10Q9Y5X0 201 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ATP8B3O60423 1300 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 STAB1Q9NY15 2570 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PLXNA2O75051 1894 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM131Q92545 1883 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MYLKQ15746 1914 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CEP192Q8TEP8 1941 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 VPS13CQ709C8 3753 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms