RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	MFSD11	O43934	449 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	PAX1	P15863	534 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	TCF4	P15884	667 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ENDOU	P21128	410 aa	Known RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	MIP	P30301	263 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	CEACAM8	P31997	349 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ACVR1B	P36896	505 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	MAGEA5	P43359	124 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	HCAR3	P49019	387 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ZNF165	P49910	485 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	HLCS	P50747	726 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	GSC	P56915	257 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	TRIM14	Q14142	442 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	KIR2DS3	Q14952	304 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	BCL7A	Q4VC05	210 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	WLS	Q5T9L3	541 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	VASN	Q6EMK4	673 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	LETMD1	Q6P1Q0	360 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	FBXO42	Q6P3S6	717 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	DNAJC24	Q6P3W2	148 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	PAPD4	Q6PIY7	484 aa	Known RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	PLXDC2	Q6UX71	529 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	PLEKHM3	Q6ZWE6	761 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ABHD13	Q7L211	337 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	POLN	Q7Z5Q5	900 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	HOMEZ	Q8IX15	550 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	C3orf56	Q8N813	242 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	LINC01555	Q8NAE3	123 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	HM13	Q8TCT9	377 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	NELFB	Q8WX92	580 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	METTL21A	Q8WXB1	218 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	MAML1	Q92585	1016 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ZMYND19	Q96E35	227 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	CABS1	Q96KC9	395 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	LINC00615	Q96LM1	132 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	CSPG4P5	Q96PW8	444 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	MIPEP	Q99797	713 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	TGIF2	Q9GZN2	237 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	ESRP2	Q9H6T0	727 aa	Known RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	TRIM45	Q9H8W5	580 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	GALNT8	Q9NY28	637 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	RCOR1	Q9UKL0	485 aa		5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	DRG1	Q9Y295	367 aa	Known RBP	5.47	□□□□□ -1.53
RACGAP1-223	ENST00000551260	EXPH5	Q8NEV8	1989 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260		A0A1B0GVC2	190 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FAM47E-STBD1	D6RA91	191 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DDX3X	O00571	662 aa	Known RBP eCLIP	5.46	□□□□□ -1.54	7e-9	■■□□□ 12.4
RACGAP1-223	ENST00000551260	AQP7	O14520	342 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MATN3	O15232	486 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FOXS1	O43638	330 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	GFPT2	O94808	682 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IGHG3	P01860	377 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TPH1	P17752	444 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PSMA2	P25787	234 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PSMB5	P28074	263 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LOX	P28300	417 aa	Predicted RBP	5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MAN2A2	P49641	1150 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MLF1	P58340	268 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TAS2R50	P59544	299 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	OCRL	Q01968	901 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	BRD3	Q15059	726 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	EXT1	Q16394	746 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MAN2A1	Q16706	1144 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TYSND1	Q2T9J0	566 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MUM1	Q2TAK8	710 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	HKDC1	Q2TB90	917 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PRTG	Q2VWP7	1150 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MINDY4	Q4G0A6	757 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SFT2D3	Q587I9	215 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PRR31	Q5SQ13	230 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LIPN	Q5VXI9	398 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	C22orf34	Q6ZV56	151 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RELL1	Q8IUW5	271 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CYP4Z2P	Q8N1L4	340 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LIX1	Q8N485	282 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TMEM251	Q8N6I4	163 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CNTD1	Q8N815	330 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MCU	Q8NE86	351 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TMEM171	Q8WVE6	324 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	HRASLS5	Q96KN8	279 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SPATA13	Q96N96	652 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IL17F	Q96PD4	163 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	WDR83	Q9BRX9	315 aa	Known RBP	5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RBM24	Q9BX46	236 aa	Known RBP	5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TTTY12	Q9BZ98	90 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ASB8	Q9H765	288 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ZWILCH	Q9H900	591 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SPTLC3	Q9NUV7	552 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RMND1	Q9NWS8	449 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	OR6C2	Q9NZP2	312 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LPAR3	Q9UBY5	353 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ADAM30	Q9UKF2	790 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TESMIN	Q9Y4I5	508 aa		5.46	□□□□□ -1.54
RACGAP1-223	ENST00000551260		A0A0U1RQJ8	604 aa		5.45	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FAM237A	A0A1B0GTK4	181 aa		5.45	□□□□□ -1.54

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