RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SERPIND1P05546 499 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 TPP2P29144 1249 aaPredicted RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 BCL6P41182 706 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 TAS2R50P59544 299 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ZNF763Q0D2J5 394 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 BNIP2Q12982 314 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 COL9A2Q14055 689 aaPredicted RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 TRIP10Q15642 601 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ZNF551Q7Z340 670 aaPredicted RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 PTRH1Q86Y79 214 aaKnown RBP18.85■□□□□ 0.61
SSH1-209ENST00000551165 AMER3Q8N944 861 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 OR8J2Q8NGG1 315 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 SHDQ96IW2 340 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 ZNF570Q96NI8 536 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 RIMS3Q9UJD0 308 aa18.85■□□□□ 0.61
SSH1-209ENST00000551165 CPSF4O95639 269 aaKnown RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 CXCR2P25025 360 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 C21orf58P58505 322 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 SRSF11Q05519 484 aaKnown RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 GPR18Q14330 331 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 PUS10Q3MIT2 529 aaKnown RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 LCN8Q6JVE9 175 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 FAM180BQ6P0A1 224 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 ZFP1Q6P2D0 407 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 PRR23BQ6ZRT6 265 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 CLEC4FQ8N1N0 589 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 DTWD1Q8N5C7 304 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 CREB3L4Q8TEY5 395 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 ZUFSPQ96AP4 578 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 KLHDC7BQ96G42 594 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 ECSITQ9BQ95 431 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 CPPED1Q9BRF8 314 aaPredicted RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 DUSP26Q9BV47 211 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 RPF2Q9H7B2 306 aaKnown RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 RMND5AQ9H871 391 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 SH3BP4Q9P0V3 963 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 AP4S1Q9Y587 144 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 ERN1O75460 977 aaKnown RBP18.84■□□□□ 0.61
SSH1-209ENST00000551165 PHEXP78562 749 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 CPTPQ5TA50 214 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 UBE3DQ7Z6J8 389 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 TRIM73Q86UV7 250 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 PANX1Q96RD7 426 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 SRMSQ9H3Y6 488 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 KLHL31Q9H511 634 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 SNX13Q9Y5W8 968 aa18.84■□□□□ 0.61
SSH1-209ENST00000551165 RPSAP08865 295 aaKnown RBP18.83■□□□□ 0.61
SSH1-209ENST00000551165 HTR1EP28566 365 aa18.83■□□□□ 0.61
SSH1-209ENST00000551165 ASMTP46597 345 aa18.83■□□□□ 0.61
SSH1-209ENST00000551165 MPEG1Q2M385 716 aa18.83■□□□□ 0.61
SSH1-209ENST00000551165 FCRL4Q96PJ5 515 aa18.83■□□□□ 0.61
SSH1-209ENST00000551165 METTL12A8MUP2 240 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 NDUFS2O75306 463 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 IL3P08700 152 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 SHMT2P34897 504 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 BSGP35613 385 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 C2orf80Q0P641 193 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 TAF11Q15544 211 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 FXNQ16595 210 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 DUOXA1Q1HG43 343 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 LPCAT2Q7L5N7 544 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 TAF8Q7Z7C8 310 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 ZNF761Q86XN6 746 aaPredicted RBP18.83■□□□□ 0.6
SSH1-209ENST00000551165 TMEM132CQ8N3T6 1108 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 PJA1Q8NG27 643 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 FLVCR1-AS1Q8TAF5 88 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 DNAJC9Q8WXX5 260 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 LRTOMTQ8WZ04 291 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 NELL1Q92832 810 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 CIDECQ96AQ7 238 aaPredicted RBP18.83■□□□□ 0.6
SSH1-209ENST00000551165 SEMA6AQ9H2E6 1030 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 KAT8Q9H7Z6 458 aaKnown RBP18.83■□□□□ 0.6
SSH1-209ENST00000551165 OR6C2Q9NZP2 312 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 V9GYQ6 96 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 SDK1Q7Z5N4 2213 aa18.83■□□□□ 0.6
SSH1-209ENST00000551165 TCRBV5S2A0A599 114 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 C4orf51C9J302 202 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 TOR1BO14657 336 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 MAP3K13O43283 966 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 PLCL1Q15111 1095 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 DPY19L1Q2PZI1 675 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 SPATS1Q496A3 300 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 SFT2D3Q587I9 215 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 GLYATQ6IB77 296 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 FAM71E1Q6IPT2 247 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 IZUMO2Q6UXV1 221 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 NAGSQ8N159 534 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 TMEM102Q8N9M5 508 aaPredicted RBP18.82■□□□□ 0.6
SSH1-209ENST00000551165 COQ8BQ96D53 544 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 GBP5Q96PP8 586 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 ABCG4Q9H172 646 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 CHRDQ9H2X0 955 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 REEP4Q9H6H4 257 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 NT5DC2Q9H857 520 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 MCM8Q9UJA3 840 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 PCDHB3Q9Y5E6 796 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 TIPRLO75663 272 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 FURINP09958 794 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 NDUFS1P28331 727 aa18.82■□□□□ 0.6
SSH1-209ENST00000551165 SLC7A1P30825 629 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms