RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MFAP5Q13361 173 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.44
NPAS3-209ENST00000551008 OR4D1Q15615 310 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 AGAP7PQ5VUJ5 663 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 B3GNTL1Q67FW5 361 aaPredicted RBP12.3□□□□□ -0.44
NPAS3-209ENST00000551008 ISLR2Q6UXK2 745 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 LINC00696Q6ZRV3 163 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 CYS1Q717R9 158 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 MAATS1Q7Z4T9 603 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 ZADH2Q8N4Q0 377 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
NPAS3-209ENST00000551008 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 CATSPER1Q8NEC5 780 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 NT5CQ8TCD5 201 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 CREB3L4Q8TEY5 395 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 RHBDF1Q96CC6 855 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 AGAP4Q96P64 663 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 RBCK1Q9BYM8 510 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 PHACTR1Q9C0D0 580 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 DERL2Q9GZP9 239 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 OCEL1Q9H607 264 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 LRRC4CQ9HCJ2 640 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 ZDHHC18Q9NUE0 388 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 CROCCQ5TZA2 2017 aa12.3□□□□□ -0.44
NPAS3-209ENST00000551008 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 NDUFS4O43181 175 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 KLHL41O60662 606 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 GALR3O60755 368 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-209ENST00000551008 VPS4BO75351 444 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 CBX6O95503 412 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 SERPINA7P05543 415 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 SMIM10L1P0DMW3 83 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 EPORP19235 508 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
NPAS3-209ENST00000551008 KCNC1P48547 511 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 PLTPP55058 493 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 OLR1P78380 273 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 POU4F1Q01851 419 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 PWP1Q13610 501 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 NR6A1Q15406 480 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 TGFBIQ15582 683 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 FBXO48Q5FWF7 155 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ADNP2Q6IQ32 1131 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 VN1R5Q7Z5H4 357 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ANKRD37Q7Z713 158 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 TMPRSS11BQ86T26 416 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ADAMTSL2Q86TH1 951 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 SIRT6Q8N6T7 355 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 UTP15Q8TED0 518 aaKnown RBP12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ATL1Q8WXF7 558 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 TSLPQ969D9 159 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 SMIM10Q96HG1 83 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 UBXN10Q96LJ8 280 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 CYTH2Q99418 400 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 TRIM54Q9BYV2 358 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ILKAPQ9H0C8 392 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-209ENST00000551008 KLHL31Q9H511 634 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ANKHQ9HCJ1 492 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 GPAMQ9HCL2 828 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 NSMCE4AQ9NXX6 385 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 CTNNAL1Q9UBT7 734 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ZFP69BQ9UJL9 534 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 VPS4AQ9UN37 437 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 ASB1Q9Y576 335 aa12.29□□□□□ -0.44
NPAS3-209ENST00000551008 HMX2A2RU54 273 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 BLACEA4D250 179 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 NDC80O14777 642 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 SEC24DO94855 1032 aaPredicted RBP12.28□□□□□ -0.44
NPAS3-209ENST00000551008 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 ZNF888P0CJ79 500 aaPredicted RBP12.28□□□□□ -0.44
NPAS3-209ENST00000551008 C8orf89P0DMQ9 161 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 CD1DP15813 335 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 AHRP35869 848 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 GP5P40197 560 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
NPAS3-209ENST00000551008 SLC7A5Q01650 507 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 EIF2S3LQ2VIR3 472 aaKnown RBP12.28□□□□□ -0.44
NPAS3-209ENST00000551008 DEFB134Q4QY38 66 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 CMC1Q7Z7K0 106 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPAS3-209ENST00000551008 TM9SF4Q92544 642 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 ESAMQ96AP7 390 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 PEX11GQ96HA9 241 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 LMF1Q96S06 567 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 NPAS2Q99743 824 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 CPNE1Q99829 537 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 PLA2G3Q9NZ20 509 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 PTGFRNQ9P2B2 879 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 COPG2Q9UBF2 871 aa12.28□□□□□ -0.44
NPAS3-209ENST00000551008 PCDH17O14917 1159 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms