RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ATP8B1O43520 1251 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 WISP3O95389 354 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MATN4O95460 622 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MT-ND3P03897 115 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ALDOAP04075 364 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ANXA6P08133 673 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MYZAPP0CAP1 466 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SLC35E2BP0CK96 405 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MPC1LP0DKB6 136 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ALPPL2P10696 532 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 F3P13726 295 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF37AP17032 561 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 NDUFS1P28331 727 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TYK2P29597 1187 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ACTR1BP42025 376 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 HALP42357 657 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ACTR1AP61163 376 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ATP6V0D1P61421 351 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 NHLH2Q02577 135 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 HSPA14Q0VDF9 509 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SP140Q13342 867 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 BOP1Q14137 746 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SHBQ15464 509 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 FAM83EQ2M2I3 478 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 KRT71Q3SY84 523 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TAF1BQ53T94 588 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF542PQ5EBM4 170 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 RBM20Q5T481 1227 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 CAPRIN2Q6IMN6 1127 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 UNC5DQ6UXZ4 953 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 FAM83HQ6ZRV2 1179 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MICALCLQ6ZW33 695 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 RD3Q7Z3Z2 195 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 GDF7Q7Z4P5 450 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TAF8Q7Z7C8 310 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TBC1D1Q86TI0 1168 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 C17orf82Q86X59 251 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 CEP97Q8IW35 865 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 CFAP206Q8IYR0 622 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SLC25A45Q8N413 288 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 DCLK2Q8N568 766 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MINDY1Q8N5J2 469 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 PNPLA1Q8N8W4 532 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SIDT2Q8NBJ9 832 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 OR4C6Q8NH72 309 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 LMX1AQ8TE12 382 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 UBXN10Q96LJ8 280 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 DCLRE1CQ96SD1 692 aaKnown RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 RUFY1Q96T51 708 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 NDNQ99608 321 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 GPR21Q99679 349 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 OLFM1Q99784 485 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 DERL2Q9GZP9 239 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 OR52A5Q9H2C5 316 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 MVB12BQ9H7P6 319 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 UCK1Q9HA47 277 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 BCO1Q9HAY6 547 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TMEM9BQ9NQ34 198 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SNX15Q9NRS6 342 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TM7SF3Q9NS93 570 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SEMA4GQ9NTN9 838 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 NLGN3Q9NZ94 848 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TAAR2Q9P1P5 351 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TBC1D29Q9UFV1 150 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TLK1Q9UKI8 766 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 CDYLQ9Y232 598 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 ACOT9Q9Y305 439 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 CHST2Q9Y4C5 530 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 PCYT1BQ9Y5K3 369 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 HEBP2Q9Y5Z4 205 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 THADAQ6YHU6 1953 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 CEP192Q8TEP8 1941 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 PLXNB3Q9ULL4 1909 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ABCA7Q8IZY2 2146 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GPR179Q6PRD1 2367 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 CACNA1EQ15878 2313 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ZFHX2Q9C0A1 2572 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 A0A096LPK6 155 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 IQCF5A8MTL0 148 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 PDZK1P1A8MUH7 402 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GFYI3L273 518 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MAP2K7O14733 419 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 RGS16O15492 202 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 FLRT2O43155 660 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ZW10O43264 779 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 RFPL1O75677 317 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 TSPAN12O95859 305 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 C2P06681 752 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 C8GP07360 202 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GSTA1P08263 222 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 MTHFD1P11586 935 aaKnown RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 OSMP13725 252 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 XRCC1P18887 633 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ACADLP28330 430 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 GRK6P43250 576 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 ABCG1P45844 678 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 SLCO1A2P46721 670 aa5.56□□□□□ -1.52
SCAF11-213ENST00000550629 FASLGP48023 281 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms