RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GOLGA8TH3BQL2 631 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 SGK494L7N484 410 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NDC80O14777 642 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NME2P1O60361 137 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 ENO3P13929 434 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NME2P22392 152 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MGAT1P26572 445 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 IMPA1P29218 277 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 TRHRP34981 398 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC26A5P58743 744 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 TAS2R50P59544 299 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MEF2AQ02078 507 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 USP10Q14694 798 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 ABRAXAS2Q15018 415 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 THEMIS2Q5TEJ8 643 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNF468Q5VIY5 522 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 KIAA0930Q6ICG6 404 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 TMEM211Q6ICI0 200 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NEPROQ6NW34 567 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 CES3Q6UWW8 571 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 PDSS2Q86YH6 399 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 TXLNBQ8N3L3 684 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 OTUD6BQ8N6M0 293 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 PRELID2Q8N945 189 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 C16orf52Q8NHV5 167 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 SDCCAG3Q96C92 435 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC30A3Q99726 388 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MACROD1Q9BQ69 325 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 LANCL2Q9NS86 450 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 HCN3Q9P1Z3 774 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 PPT2Q9UMR5 302 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MED16Q9Y2X0 877 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NEU2Q9Y3R4 380 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 NF1P21359 2839 aa9.25□□□□□ -0.93
TRAFD1-207ENST00000550051 MAGEB16A2A368 324 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 FAM221AA4D161 298 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 EIF3FO00303 357 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 LCMT2O60294 686 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC25A12O75746 678 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SYF2O95926 243 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNF24P17028 368 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 IL1RNP18510 177 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 PAMP19021 973 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 TPSB2P20231 275 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 TPP2P29144 1249 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 PTGS2P35354 604 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 CYB561P49447 251 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ST13P50502 369 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 HLCSP50747 726 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 OR4D2P58180 307 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 MLF1P58340 268 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 HSF1Q00613 529 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SIX1Q15475 284 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 TPSAB1Q15661 275 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 CAPN13Q6MZZ7 669 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNF549Q6P9A3 640 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 C3P1Q6ZMU1 363 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ASPGQ86U10 573 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 AFAP1L2Q8N4X5 818 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 KCT2Q8NC54 265 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 OR4K1Q8NGD4 311 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 GIMAP7Q8NHV1 300 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 FAM57AQ8TBR7 257 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC13A3Q8WWT9 602 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ASB5Q8WWX0 329 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 KCNJ9Q92806 393 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 CCDC138Q96M89 665 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SARGQ9BW04 601 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 CLK4Q9HAZ1 481 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 SYBUQ9NX95 663 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 ZKSCAN5Q9Y2L8 839 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 NAALAD2Q9Y3Q0 740 aa9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 PHF3Q92576 2039 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-207ENST00000550051 FEZF1A0PJY2 475 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 KLRC4-KLRK1H3BQV0 150 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 RDH16O75452 317 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 TOXO94900 526 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 STATHP02808 62 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 NPPBP16860 134 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 CCND1P24385 295 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 BASP1P80723 227 aaKnown RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 TFF3Q07654 80 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 PWP1Q13610 501 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 HERC3Q15034 1050 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 NIPAL1Q6NVV3 410 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 UBE2R2Q712K3 238 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC26A11Q86WA9 606 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 C17orf64Q86WR6 236 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 SULF2Q8IWU5 870 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 CPSF7Q8N684 471 aaKnown RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 MFSD9Q8NBP5 474 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 NFAM1Q8NET5 270 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 ABHD11Q8NFV4 315 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms