RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 VPS37AQ8NEZ2 397 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 OR5AR1Q8NGP9 310 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 OR5K1Q8NHB7 308 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 FAM120BQ96EK7 910 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TRIM8Q9BZR9 551 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 DDX31Q9H8H2 851 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 AHSPQ9NZD4 102 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 RPS6KA6Q9UK32 745 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TRIM64BA6NI03 449 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF701M0R085 212 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 SLC16A6O15403 523 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 GMNNO75496 209 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 EPN2O95208 641 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 IFI6P09912 130 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ITGAMP11215 1152 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 COX7A2P14406 83 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF23P17027 643 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 CCR8P51685 355 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ARSFP54793 590 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 TEAD4Q15561 434 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 MPEG1Q2M385 716 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 TMPRSS11BQ86T26 416 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 SYTL1Q8IYJ3 562 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 OR52N2Q8NGI0 321 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 PNPT1Q8TCS8 783 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 NETO1Q8TDF5 533 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 CREB3L4Q8TEY5 395 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 SLC47A1Q96FL8 570 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 QRFPRQ96P65 431 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 MTERF1Q99551 399 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 APOOQ9BUR5 198 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 THUMPD3Q9BV44 507 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 SPNS1Q9H2V7 528 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 AASDHPPTQ9NRN7 309 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 EHD3Q9NZN3 535 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 PADI2Q9Y2J8 665 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 TMEM98Q9Y2Y6 226 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 A6NCN8 305 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 EVPLLA8MZ36 301 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 LATO43561 262 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 RNGTTO60942 597 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 FKBP9O95302 570 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 PCCBP05166 539 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ENGP17813 658 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 TPP2P29144 1249 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ATXN3P54252 364 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 NR1H2P55055 460 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 SLC14A1Q13336 389 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 RGNQ15493 299 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 RFX4Q33E94 735 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 FBXO43Q4G163 708 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 KHDRBS2Q5VWX1 349 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 KIAA1211LQ6NV74 962 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ZC3H7AQ8IWR0 971 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 LINC01555Q8NAE3 123 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ZFAND2BQ8WV99 257 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 AIF1LQ9BQI0 150 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 TM9SF3Q9HD45 589 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 LHX9Q9NQ69 397 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 DDX18Q9NVP1 670 aaKnown RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 IFT80Q9P2H3 777 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ANKMY1Q9P2S6 941 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 VPS4AQ9UN37 437 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 AURKCQ9UQB9 309 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF451Q9Y4E5 1061 aa9.57□□□□□ -0.88
RAB5B-206ENST00000549505 AHRP35869 848 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 RAB28P51157 221 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 CRYBA2P53672 197 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 PCBP4P57723 403 aaKnown RBP9.56□□□□□ -0.88
RAB5B-206ENST00000549505 PRDX1Q06830 199 aaKnown RBP9.56□□□□□ -0.88
RAB5B-206ENST00000549505 CEBPEQ15744 281 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 UAP1L1Q3KQV9 507 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 CRB2Q5IJ48 1285 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 DOK6Q6PKX4 331 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ENPP6Q6UWR7 440 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 C17orf64Q86WR6 236 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 HIPK1Q86Z02 1210 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ADHFE1Q8IWW8 467 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 RAB42Q8N4Z0 105 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 METTL25Q8N6Q8 603 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 FAM47BQ8NA70 645 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ZNF566Q969W8 418 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 MKRN2Q9H000 416 aaKnown RBP9.56□□□□□ -0.88
RAB5B-206ENST00000549505 CERS4Q9HA82 394 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 TMEM184CQ9NVA4 438 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 PCDHGB4Q9UN71 923 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ASF1AQ9Y294 204 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 PCDHGB5Q9Y5G0 923 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 HS3ST3A1Q9Y663 406 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 HSPE1-MOB4S4R3N1 261 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 hCG_2014768A0A024R1R8 64 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 A0A1W2PP55 124 aa9.56□□□□□ -0.88
RAB5B-206ENST00000549505 ANTXRLA6NF34 631 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms