RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SCRN2Q96FV2 425 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 TRMT2BQ96GJ1 504 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 CDCA4Q9BXL8 241 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 BRF2Q9HAW0 419 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 THSD1Q9NS62 852 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 EHD3Q9NZN3 535 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ENOPH1Q9UHY7 261 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 VPS4AQ9UN37 437 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 PLXNB3Q9ULL4 1909 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 SH3D21A4FU49 640 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NT5C1B-RDH14C9J2C7 533 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 H0YIV9 168 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PSMD11O00231 422 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ITGA2P17301 1181 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CD22P20273 847 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 GATMP50440 423 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 SMAD3P84022 425 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CARTPTQ16568 116 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 AGAP6Q5VW22 663 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 LRRC66Q68CR7 880 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NLRP8Q86W28 1048 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 TMEM173Q86WV6 379 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RASGRP3Q8IV61 690 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 VRK3Q8IV63 474 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NAGSQ8N159 534 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 MAL2Q969L2 176 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 AGAP4Q96P64 663 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CHCHD6Q9BRQ6 235 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NUAK2Q9H093 628 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NEK6Q9HC98 313 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PRDM8Q9NQV8 689 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CNOT2Q9NZN8 540 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 TRAPPC4Q9Y296 219 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PPIL1Q9Y3C6 166 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF451Q9Y4E5 1061 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 A0A075B6Q4 140 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 A8MU76 341 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RNASET2O00584 256 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ZW10O43264 779 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 MPZL2O60487 215 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF821O75541 412 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 HLA-EP13747 358 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 IDSP22304 550 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 AQP1P29972 269 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 OR1D2P34982 312 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 BMPR1AP36894 532 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 HNF4AP41235 474 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NUDT6P53370 316 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RAE1P78406 368 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 SPIBQ01892 262 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PTSQ03393 145 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RBBP4Q09028 425 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 GAB1Q13480 694 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 XKR6Q5GH73 641 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 USP45Q70EL2 814 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 SAPCD2Q86UD0 394 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 LGI4Q8N135 537 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CYP4Z2PQ8N1L4 340 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 GALNT6Q8NCL4 622 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 FLCNQ8NFG4 579 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 OR2AP1Q8NGE2 309 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 GOT1L1Q8NHS2 421 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CDC26Q8NHZ8 85 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CXorf40BQ96DE9 158 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 Q96MT0 163 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CCM2Q9BSQ5 444 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ATG10Q9H0Y0 220 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RNF167Q9H6Y7 350 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF556Q9HAH1 456 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 RLIMQ9NVW2 624 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 IMPAD1Q9NX62 359 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 MS4A12Q9NXJ0 267 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 FBXL12Q9NXK8 326 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CRNNQ9UBG3 495 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 GABRQQ9UN88 632 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 DUSP12Q9UNI6 340 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 BACE2Q9Y5Z0 518 aa9.51□□□□□ -0.89
SMARCD1-205ENST00000548573 CCRL2O00421 344 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 KIAA0513O60268 411 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 GREM1O60565 184 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CCNKO75909 580 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ATP1B2P14415 290 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CCND3P30281 292 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 RCVRNP35243 200 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 TIE1P35590 1138 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 NR4A2P43354 598 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ALDH9A1P49189 494 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 HMGA2P52926 109 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms