RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 HERC3Q15034 1050 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 ASPGQ86U10 573 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 CYP4X1Q8N118 509 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 MMP21Q8N119 569 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 ZCCHC10Q8TBK6 192 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 TBC1D20Q96BZ9 403 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 PEX11GQ96HA9 241 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 DEFB126Q9BYW3 111 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 UCK2Q9BZX2 261 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 SLC6A16Q9GZN6 736 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 CCDC68Q9H2F9 335 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 DNAJB12Q9NXW2 375 aaKnown RBP15.87■□□□□ 0.13
VPS29-204ENST00000548259 CRYL1Q9Y2S2 319 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 NAALAD2Q9Y3Q0 740 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 SLC22A7Q9Y694 548 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 DUSP10Q9Y6W6 482 aa15.87■□□□□ 0.13
VPS29-204ENST00000548259 ENO3P13929 434 aaPredicted RBP15.86■□□□□ 0.13
VPS29-204ENST00000548259 PAMP19021 973 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 MLF1P58340 268 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 TFF3Q07654 80 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 PMPCAQ10713 525 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 TYSND1Q2T9J0 566 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 VN1R4Q7Z5H5 301 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 LRRC57Q8N9N7 239 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 ARMC2Q8NEN0 867 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 OR5M3Q8NGP4 307 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 SLC13A3Q8WWT9 602 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 EIF2B3Q9NR50 452 aaKnown RBP15.86■□□□□ 0.13
VPS29-204ENST00000548259 KLHL42Q9P2K6 505 aa15.86■□□□□ 0.13
VPS29-204ENST00000548259 EPN1Q9Y6I3 576 aaPredicted RBP15.86■□□□□ 0.13
VPS29-204ENST00000548259 LIASO43766 372 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 PEX1O43933 1283 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 HS6ST1O60243 411 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 FHP07954 510 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 FOSL1P15407 271 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 OGNP20774 298 aaKnown RBP15.85■□□□□ 0.13
VPS29-204ENST00000548259 NMBRP28336 390 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 ZNF468Q5VIY5 522 aaPredicted RBP15.85■□□□□ 0.13
VPS29-204ENST00000548259 CAPN13Q6MZZ7 669 aaPredicted RBP15.85■□□□□ 0.13
VPS29-204ENST00000548259 C4orf22Q6V702 233 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 C17orf64Q86WR6 236 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 SULF2Q8IWU5 870 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TXLNBQ8N3L3 684 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 MARVELD2Q8N4S9 558 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TBC1D19Q8N5T2 526 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TMEM156Q8N614 296 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TC2NQ8N9U0 490 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 C16orf52Q8NHV5 167 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 ASB11Q8WXH4 323 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 ATG4AQ8WYN0 398 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TSLPQ969D9 159 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 SEC16BQ96JE7 1060 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 RBCK1Q9BYM8 510 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 TSGA10Q9BZW7 698 aa15.85■□□□□ 0.13
VPS29-204ENST00000548259 CCM2LQ9NUG4 571 aaPredicted RBP15.85■□□□□ 0.13
VPS29-204ENST00000548259 MAP1AP78559 2803 aaPredicted RBP15.84■□□□□ 0.13
VPS29-204ENST00000548259 SCN2AQ99250 2005 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 FAM237BA0A1B0GVD1 139 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 GRID2IPA4D2P6 1211 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 ACOT7O00154 380 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 KLK8O60259 260 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 MPC1LP0DKB6 136 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 DNASE1P24855 282 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 PEX19P40855 299 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 CRADDP78560 199 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 KCNJ11Q14654 390 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 OASLQ15646 514 aaKnown RBP15.84■□□□□ 0.13
VPS29-204ENST00000548259 CMPK2Q5EBM0 449 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 CCDC71Q8IV32 467 aaPredicted RBP15.84■□□□□ 0.13
VPS29-204ENST00000548259 CYP4Z2PQ8N1L4 340 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 KIF2BQ8N4N8 673 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 KCT2Q8NC54 265 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 OR10Q1Q8NGQ4 319 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 CREB3L4Q8TEY5 395 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 TM4SF19Q96DZ7 209 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 PTCHD1Q96NR3 888 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 MACROD1Q9BQ69 325 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 POLDIP3Q9BY77 421 aaKnown RBP15.84■□□□□ 0.13
VPS29-204ENST00000548259 TIMMDC1Q9NPL8 285 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 LANCL2Q9NS86 450 aa15.84■□□□□ 0.13
VPS29-204ENST00000548259 INTS10Q9NVR2 710 aaKnown RBP15.84■□□□□ 0.13
VPS29-204ENST00000548259 TCRBV7S2A1N4TA0A589 114 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 TMEM200CA6NKL6 621 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 FIGNL2A6NMB9 653 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 PSMD12O00232 456 aaPredicted RBP15.83■□□□□ 0.12
VPS29-204ENST00000548259 CCND1P24385 295 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 RFC3P40938 356 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 SKIV2L2P42285 1042 aaKnown RBP15.83■□□□□ 0.12
VPS29-204ENST00000548259 RPS6KA1Q15418 735 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 SEL1L2Q5TEA6 688 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 RGS9BPQ6ZS82 235 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 KIAA1328Q86T90 577 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 SLC26A11Q86WA9 606 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 PDSS2Q86YH6 399 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 ZFP62Q8NB50 900 aaPredicted RBP15.83■□□□□ 0.12
VPS29-204ENST00000548259 RMND5BQ96G75 393 aaPredicted RBP15.83■□□□□ 0.12
VPS29-204ENST00000548259 KIFC1Q9BW19 673 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 ST6GALNAC2Q9UJ37 374 aa15.83■□□□□ 0.12
VPS29-204ENST00000548259 PACSIN2Q9UNF0 486 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms