RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CDC123O75794 336 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 NSA2O95478 260 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CLDN1O95832 211 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TSPAN12O95859 305 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 WDPCPO95876 746 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 LDLRP01130 860 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SLC35G6P0C7Q6 338 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 FDXRP22570 491 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CCND1P24385 295 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 HNF4AP41235 474 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PAFAH1B1P43034 410 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ST13P50502 369 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TNFSF10P50591 281 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CCR8P51685 355 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ITGA8P53708 1063 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ARL4CP56559 192 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 MRPS25P82663 173 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF33BQ06732 778 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ACTN3Q08043 901 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PDIA2Q13087 525 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SP140Q13342 867 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CSHL1Q14406 222 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 MORF4L2Q15014 288 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 NSDHLQ15738 373 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ZXDCQ2QGD7 858 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 BTBD16Q32M84 506 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CATSPEREQ5SY80 951 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 DUPD1Q68J44 220 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 FCRLBQ6BAA4 426 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 HIBCHQ6NVY1 386 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 LCTLQ6UWM7 567 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 LANCL3Q6ZV70 420 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SYDE1Q6ZW31 735 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CPEB2Q7Z5Q1 589 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ANKRD37Q7Z713 158 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PDSS2Q86YH6 399 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CREG2Q8IUH2 290 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 CNTN4Q8IWV2 1026 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 BCORP1Q8N888 145 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 OR5T3Q8NGG3 340 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 OR56A3Q8NH54 315 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SUN3Q8TAQ9 357 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SLCO2A1Q92959 643 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TM4SF19Q96DZ7 209 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF837Q96EG3 531 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PEX11GQ96HA9 241 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 IMMP1LQ96LU5 166 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TSNARE1Q96NA8 513 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 OR4K3Q96R72 315 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 OLFM1Q99784 485 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TRIM51Q9BSJ1 452 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 HAUS8Q9BT25 410 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TUBB6Q9BUF5 446 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 RBCK1Q9BYM8 510 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 PLAC1Q9HBJ0 212 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 OLAHQ9NV23 265 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 IKZF3Q9UKT9 509 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SNX24Q9Y343 169 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 SAR1BQ9Y6B6 198 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TEX264Q9Y6I9 313 aa6.33□□□□□ -1.4
SCAF11-211ENST00000547950 USP9YO00507 2555 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 TNRC6AQ8NDV7 1962 aaKnown RBP6.33□□□□□ -1.4
SCAF11-211ENST00000547950 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-211ENST00000547950 PTPN13Q12923 2485 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 A0A1W2PQ72 361 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 CDC7O00311 574 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 CHST10O43529 356 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 B4GALT2O60909 372 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 PIAS1O75925 651 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 RASAL1O95294 804 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 B3GALT4O96024 378 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 MYBL2P10244 700 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 EDN3P14138 238 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 SOX11P35716 441 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 SCTRP47872 440 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 AP1S2P56377 157 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 KCNK10P57789 538 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 RAB8AP61006 207 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 AP2B1P63010 937 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 OLR1P78380 273 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 MGAT5Q09328 741 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 ABRAXAS2Q15018 415 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 RBBP5Q15291 538 aaKnown RBP6.32□□□□□ -1.4
SCAF11-211ENST00000547950 DEFB134Q4QY38 66 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 SFT2D3Q587I9 215 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 FAM45BPQ6NSW5 357 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 RPUSD3Q6P087 351 aaKnown RBP6.32□□□□□ -1.4
SCAF11-211ENST00000547950 TMEM207Q6UWW9 146 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 CAPN12Q6ZSI9 719 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-211ENST00000547950 GALNT7Q86SF2 657 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 THOC6Q86W42 341 aaKnown RBP6.32□□□□□ -1.4
SCAF11-211ENST00000547950 TBC1D19Q8N5T2 526 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF740Q8NDX6 193 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 FBXO36Q8NEA4 188 aa6.32□□□□□ -1.4
SCAF11-211ENST00000547950 ABHD11Q8NFV4 315 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms