RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 CRB3Q9BUF7 120 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 SLC25A18Q9H1K4 315 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 ANKHQ9HCJ1 492 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 MKKSQ9NPJ1 570 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 ACSS2Q9NR19 701 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 P4HTMQ9NXG6 502 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 OPTCQ9UBM4 332 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 SCN3AQ9NY46 2000 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 COL6A6A6NMZ7 2263 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 BOD1L1Q8NFC6 3051 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 MKRN2OSH3BPM6 223 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 K7EPI3 171 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SGK494L7N484 410 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 PEX12O00623 359 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 RBP1P09455 135 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 CCL11P51671 97 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 ALDH18A1P54886 795 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 VSNL1P62760 191 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 DOC2AQ14183 400 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SETDB1Q15047 1291 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 TSNAXIP1Q2TAA8 658 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SHISA5Q8N114 240 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 KRT78Q8N1N4 520 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 AFAP1L2Q8N4X5 818 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 C9orf43Q8TAL5 461 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 CREB3L4Q8TEY5 395 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 WDR34Q96EX3 536 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 PTCD3Q96EY7 689 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SCYL1Q96KG9 808 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 TGIF2Q9GZN2 237 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 NT5DC2Q9H857 520 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 SEMA3GQ9NS98 782 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 CPSF2Q9P2I0 782 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 PSMC3IPQ9P2W1 217 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 COPG2Q9UBF2 871 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 C3orf18Q9UK00 162 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 NAALAD2Q9Y3Q0 740 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 HS3ST3B1Q9Y662 390 aa17.75■□□□□ 0.43
PRPF40B-206ENST00000547764 TLN1Q9Y490 2541 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 IQANK1A0A1B0GTG1 560 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 SOCS6O14544 535 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 KLHL18O94889 574 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 IGHEP01854 428 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 SHBGP04278 402 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 SERPINA6P08185 405 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 CD22P20273 847 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 RRADP55042 308 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 IRF8Q02556 426 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 HYAL2Q12891 473 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 NFATC3Q12968 1075 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 CHIT1Q13231 466 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 HERC3Q15034 1050 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 ZC3H7AQ8IWR0 971 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 TTLQ8NG68 377 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 UTP15Q8TED0 518 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 FER1L6-AS2Q96M78 137 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 SLC6A16Q9GZN6 736 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 PITHD1Q9GZP4 211 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 KLHL31Q9H511 634 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 ZNF71Q9NQZ8 489 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 C14orf105Q9NVL8 296 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 HCN3Q9P1Z3 774 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 XPR1Q9UBH6 696 aa17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 ZNF490Q9ULM2 529 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-206ENST00000547764 BSNQ9UPA5 3926 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 LRRC14BA6NHZ5 514 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 AGPSO00116 658 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 MASP2O00187 686 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 GALR3O60755 368 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 RDH16O75452 317 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 WFS1O76024 890 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 BMP10O95393 424 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 B3GALT4O96024 378 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 ZNF888P0CJ79 500 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 EPB42P16452 691 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 ALOX12P18054 663 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 HNF4AP41235 474 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 CASP2P42575 452 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 C19orf57Q0VDD7 668 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 E2F2Q14209 437 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 NAA30Q147X3 362 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 PCBP2Q15366 365 aaKnown RBP eCLIP17.73■□□□□ 0.439e-7■■■■□ 24.1
PRPF40B-206ENST00000547764 TBCCQ15814 346 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 RBBP7Q16576 425 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 DEFB134Q4QY38 66 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 DCAF10Q5QP82 559 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 KIRREL2Q6UWL6 708 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 ABHD13Q7L211 337 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 TEX9Q8N6V9 391 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 OR51Q1Q8NH59 317 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 MESP1Q9BRJ9 268 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 EFCAB11Q9BUY7 163 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 AICDAQ9GZX7 198 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 TBK1Q9UHD2 729 aa17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 V9GYY5 206 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-206ENST00000547764 URADA6NGE7 173 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 ZNF860A6NHJ4 632 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms