RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 ERVK-21P61565 698 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 PDGFRLQ15198 375 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 AAK1Q2M2I8 961 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 PYDC2Q56P42 97 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 FAM20CQ8IXL6 584 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 GPATCH1Q9BRR8 931 aaKnown RBP15.14■□□□□ 0.01
CUX1-211ENST00000546411 ACPTQ9BZG2 426 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 ARMC1Q9NVT9 282 aa15.14■□□□□ 0.01
CUX1-211ENST00000546411 A0A1B0GTW7 788 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CPSF4LA6NMK7 179 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 GNB5O14775 395 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 GNRH1P01148 92 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 C9P02748 559 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 GGT1P19440 569 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 GPM6BQ13491 265 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 LASP1Q14847 261 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 LRRTM4Q86VH4 590 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SNTG1Q9NSN8 517 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CACNA1CQ13936 2221 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 PRR23D1E9PI22 279 aaPredicted RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 CASKO14936 926 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 IGLV3-25P01717 112 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 PRR23D2P0DMB1 279 aaPredicted RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 ANXA8P13928 327 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 AGXTP21549 392 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 TM4SF4P48230 202 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 NRIP1P48552 1158 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 OLR1P78380 273 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CCDC92Q53HC0 331 aaPredicted RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 ATAT1Q5SQI0 421 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CATSPEREQ5SY80 951 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 ATG9BQ674R7 924 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 HSD11B1LQ7Z5J1 315 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 TCEAL8Q8IYN2 117 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CACTIN-AS1Q8N1I8 211 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 DNASE1L2Q92874 299 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 F2RL3Q96RI0 385 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 POLR2J2Q9GZM3 115 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 DCSTAMPQ9H295 470 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SERHL2Q9H4I8 314 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SERHLQ9NQF3 203 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 LRRC72A6NJI9 287 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 WASH3PC4AMC7 463 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SNPHO15079 494 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 JUPP14923 745 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CCR8P51685 355 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CTSCP53634 463 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CD47Q08722 323 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SFSWAPQ12872 951 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 CDC73Q6P1J9 531 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 USP30Q70CQ3 517 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CELF5Q8N6W0 485 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 ZNF597Q96LX8 424 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 BIRC8Q96P09 236 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 MRPS30Q9NP92 439 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 ZNF624Q9P2J8 865 aaPredicted RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 MALT1Q9UDY8 824 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 DOCK3Q8IZD9 2030 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 NDUFS4O43181 175 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 IL3P08700 152 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SDC1P18827 310 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SRP54P61011 504 aaKnown RBP15.13■□□□□ 0.01
CUX1-211ENST00000546411 GNA13Q14344 377 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CRB2Q5IJ48 1285 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 TMEM236Q5W0B7 351 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SLC39A11Q8N1S5 342 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 HERVK_113Q902F9 699 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SPACA7Q96KW9 195 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SEZ6LQ9BYH1 1024 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 SPATA7Q9P0W8 599 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 CCL26Q9Y258 94 aa15.13■□□□□ 0.01
CUX1-211ENST00000546411 LY75O60449 1722 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 A0A0J9YVX5 310 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 FEZF1A0PJY2 475 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 BMP10O95393 424 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 PENKP01210 267 aaPredicted RBP15.12■□□□□ 0.01
CUX1-211ENST00000546411 LAMP2P13473 410 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 PRG2P13727 222 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 PTX3P26022 381 aaPredicted RBP15.12■□□□□ 0.01
CUX1-211ENST00000546411 PTGER1P34995 402 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 HK3P52790 923 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 FPGSQ05932 587 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 SNAP47Q5SQN1 464 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 CXorf57Q6NSI4 855 aaKnown RBP15.12■□□□□ 0.01
CUX1-211ENST00000546411 IQCHQ86VS3 1027 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 NUDT13Q86X67 352 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 TMEM102Q8N9M5 508 aaPredicted RBP15.12■□□□□ 0.01
CUX1-211ENST00000546411 LINC01599Q8WXQ3 324 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 TFAP2CQ92754 450 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 SLC38A4Q969I6 547 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 ANKRD60Q9BZ19 345 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 AGPAT4Q9NRZ5 378 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 IGLV3-10A0A075B6K4 115 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 MAGEB3O15480 346 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 RPP38P78345 283 aaKnown RBP15.12■□□□□ 0.01
CUX1-211ENST00000546411 SLC9A5Q14940 896 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 KIAA1614Q5VZ46 1190 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 ENPP7Q6UWV6 458 aa15.12■□□□□ 0.01
CUX1-211ENST00000546411 MACC1Q6ZN28 852 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms