RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PCSK5Q92824 1860 aa8.83□□□□□ -1
YBX3-218ENST00000546298 ESPL1Q14674 2120 aa8.83□□□□□ -1
YBX3-218ENST00000546298 OR5H15A6NDH6 313 aa8.83□□□□□ -1
YBX3-218ENST00000546298 A8MUI8 341 aa8.83□□□□□ -1
YBX3-218ENST00000546298 CHST10O43529 356 aa8.83□□□□□ -1
YBX3-218ENST00000546298 GALR3O60755 368 aaPredicted RBP8.83□□□□□ -1
YBX3-218ENST00000546298 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
YBX3-218ENST00000546298 WDPCPO95876 746 aa8.83□□□□□ -1
YBX3-218ENST00000546298 LDLRP01130 860 aa8.83□□□□□ -1
YBX3-218ENST00000546298 ITGAMP11215 1152 aa8.83□□□□□ -1
YBX3-218ENST00000546298 RPL21P46778 160 aaKnown RBP8.83□□□□□ -1
YBX3-218ENST00000546298 SCTRP47872 440 aa8.83□□□□□ -1
YBX3-218ENST00000546298 TAS2R39P59534 338 aa8.83□□□□□ -1
YBX3-218ENST00000546298 TAS2R50P59544 299 aa8.83□□□□□ -1
YBX3-218ENST00000546298 REEP5Q00765 189 aa8.83□□□□□ -1
YBX3-218ENST00000546298 POU4F1Q01851 419 aa8.83□□□□□ -1
YBX3-218ENST00000546298 ZNF33BQ06732 778 aa8.83□□□□□ -1
YBX3-218ENST00000546298 RBBP5Q15291 538 aaKnown RBP8.83□□□□□ -1
YBX3-218ENST00000546298 ZXDCQ2QGD7 858 aaPredicted RBP8.83□□□□□ -1
YBX3-218ENST00000546298 DEFB134Q4QY38 66 aa8.83□□□□□ -1
YBX3-218ENST00000546298 SFT2D3Q587I9 215 aa8.83□□□□□ -1
YBX3-218ENST00000546298 ACER2Q5QJU3 275 aa8.83□□□□□ -1
YBX3-218ENST00000546298 CATSPEREQ5SY80 951 aa8.83□□□□□ -1
YBX3-218ENST00000546298 NXPE4Q6UWF7 544 aa8.83□□□□□ -1
YBX3-218ENST00000546298 SBSNQ6UWP8 590 aa8.83□□□□□ -1
YBX3-218ENST00000546298 PRSS41Q7RTY9 318 aa8.83□□□□□ -1
YBX3-218ENST00000546298 MAMDC2Q7Z304 686 aaPredicted RBP8.83□□□□□ -1
YBX3-218ENST00000546298 ANKRD37Q7Z713 158 aa8.83□□□□□ -1
YBX3-218ENST00000546298 PDSS2Q86YH6 399 aa8.83□□□□□ -1
YBX3-218ENST00000546298 AFAP1L2Q8N4X5 818 aa8.83□□□□□ -1
YBX3-218ENST00000546298 ARMC2Q8NEN0 867 aa8.83□□□□□ -1
YBX3-218ENST00000546298 TTLQ8NG68 377 aa8.83□□□□□ -1
YBX3-218ENST00000546298 DNAJB8Q8NHS0 232 aa8.83□□□□□ -1
YBX3-218ENST00000546298 NEIL2Q969S2 332 aa8.83□□□□□ -1
YBX3-218ENST00000546298 TBC1D20Q96BZ9 403 aa8.83□□□□□ -1
YBX3-218ENST00000546298 PEX11GQ96HA9 241 aa8.83□□□□□ -1
YBX3-218ENST00000546298 PDLIM2Q96JY6 352 aa8.83□□□□□ -1
YBX3-218ENST00000546298 OR4K3Q96R72 315 aa8.83□□□□□ -1
YBX3-218ENST00000546298 SLX1AQ9BQ83 275 aa8.83□□□□□ -1
YBX3-218ENST00000546298 WDR83Q9BRX9 315 aaKnown RBP8.83□□□□□ -1
YBX3-218ENST00000546298 ERP44Q9BS26 406 aa8.83□□□□□ -1
YBX3-218ENST00000546298 CAPS2Q9BXY5 557 aa8.83□□□□□ -1
YBX3-218ENST00000546298 KCNK13Q9HB14 408 aa8.83□□□□□ -1
YBX3-218ENST00000546298 GPAMQ9HCL2 828 aa8.83□□□□□ -1
YBX3-218ENST00000546298 WHRNQ9P202 907 aa8.83□□□□□ -1
YBX3-218ENST00000546298 OSGIN2Q9Y236 505 aa8.83□□□□□ -1
YBX3-218ENST00000546298 OARD1Q9Y530 152 aa8.83□□□□□ -1
YBX3-218ENST00000546298 PSAT1Q9Y617 370 aa8.83□□□□□ -1
YBX3-218ENST00000546298 IGHV3-20A0A0C4DH32 117 aa8.82□□□□□ -1
YBX3-218ENST00000546298 A0A1B0GUH1 482 aa8.82□□□□□ -1
YBX3-218ENST00000546298 NPEPPSL1A6NEC2 478 aa8.82□□□□□ -1
YBX3-218ENST00000546298 ZNF860A6NHJ4 632 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PSMD12O00232 456 aaPredicted RBP8.82□□□□□ -1
YBX3-218ENST00000546298 CDC7O00311 574 aa8.82□□□□□ -1
YBX3-218ENST00000546298 E2F3O00716 465 aa8.82□□□□□ -1
YBX3-218ENST00000546298 CDK2AP1O14519 115 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PRAMEF2O60811 474 aa8.82□□□□□ -1
YBX3-218ENST00000546298 RASAL1O95294 804 aa8.82□□□□□ -1
YBX3-218ENST00000546298 FHP07954 510 aa8.82□□□□□ -1
YBX3-218ENST00000546298 SERPINA6P08185 405 aa8.82□□□□□ -1
YBX3-218ENST00000546298 CELA2AP08217 269 aa8.82□□□□□ -1
YBX3-218ENST00000546298 GSTA2P09210 222 aa8.82□□□□□ -1
YBX3-218ENST00000546298 ZNF888P0CJ79 500 aaPredicted RBP8.82□□□□□ -1
YBX3-218ENST00000546298 GNAZP19086 355 aa8.82□□□□□ -1
YBX3-218ENST00000546298 GSTM2P28161 218 aa8.82□□□□□ -1
YBX3-218ENST00000546298 HPDP32754 393 aaPredicted RBP8.82□□□□□ -1
YBX3-218ENST00000546298 PGGT1BP53609 377 aa8.82□□□□□ -1
YBX3-218ENST00000546298 OR4D2P58180 307 aa8.82□□□□□ -1
YBX3-218ENST00000546298 STXBP1P61764 594 aaKnown RBP8.82□□□□□ -1
YBX3-218ENST00000546298 SNRPNP63162 240 aaKnown RBP8.82□□□□□ -1
YBX3-218ENST00000546298 RHAGQ02094 409 aa8.82□□□□□ -1
YBX3-218ENST00000546298 ABRAXAS2Q15018 415 aa8.82□□□□□ -1
YBX3-218ENST00000546298 MEP1AQ16819 746 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PPP1R3AQ16821 1122 aa8.82□□□□□ -1
YBX3-218ENST00000546298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.82□□□□□ -14e-7■■■□□ 16.4
YBX3-218ENST00000546298 CDKL4Q5MAI5 379 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PAPD4Q6PIY7 484 aaKnown RBP8.82□□□□□ -1
YBX3-218ENST00000546298 TMEM207Q6UWW9 146 aa8.82□□□□□ -1
YBX3-218ENST00000546298 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
YBX3-218ENST00000546298 CYS1Q717R9 158 aa8.82□□□□□ -1
YBX3-218ENST00000546298 TMPRSS11BQ86T26 416 aa8.82□□□□□ -1
YBX3-218ENST00000546298 KRT78Q8N1N4 520 aa8.82□□□□□ -1
YBX3-218ENST00000546298 TCAIMQ8N3R3 496 aa8.82□□□□□ -1
YBX3-218ENST00000546298 SLC5A8Q8N695 610 aa8.82□□□□□ -1
YBX3-218ENST00000546298 HORMAD2Q8N7B1 307 aa8.82□□□□□ -1
YBX3-218ENST00000546298 ZNF740Q8NDX6 193 aa8.82□□□□□ -1
YBX3-218ENST00000546298 NR4A3Q92570 626 aa8.82□□□□□ -1
YBX3-218ENST00000546298 SEC16BQ96JE7 1060 aa8.82□□□□□ -1
YBX3-218ENST00000546298 TSNARE1Q96NA8 513 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PITHD1Q9GZP4 211 aaPredicted RBP8.82□□□□□ -1
YBX3-218ENST00000546298 DERL2Q9GZP9 239 aa8.82□□□□□ -1
YBX3-218ENST00000546298 MMP25Q9NPA2 562 aa8.82□□□□□ -1
YBX3-218ENST00000546298 SAYSD1Q9NPB0 183 aa8.82□□□□□ -1
YBX3-218ENST00000546298 LANCL2Q9NS86 450 aa8.82□□□□□ -1
YBX3-218ENST00000546298 SLC22A14Q9Y267 594 aa8.82□□□□□ -1
YBX3-218ENST00000546298 PTPN13Q12923 2485 aa8.82□□□□□ -1
YBX3-218ENST00000546298 LRRK2Q5S007 2527 aa8.82□□□□□ -1
YBX3-218ENST00000546298 CNTRLQ7Z7A1 2325 aa8.81□□□□□ -1
YBX3-218ENST00000546298 TNRC6AQ8NDV7 1962 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 FER1L5A0AVI2 2057 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms