RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 H3BM21 787 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 PRMT3O60678 531 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CLDN11O75508 207 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CCNB2O95067 398 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 OPN1SWP03999 348 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ADRA2AP08913 450 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ACRV1P26436 265 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CA8P35219 290 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SLC11A2P49281 568 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SELENOWP63302 87 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 PSPHP78330 225 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 HYAL2Q12891 473 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 Q5BKY6 102 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CADM2Q8N3J6 435 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 OR9Q2Q8NGE9 314 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 OR8J2Q8NGG1 315 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SH3KBP1Q96B97 665 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 WDFY2Q96P53 400 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 OPALINQ96PE5 141 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ADAM2Q99965 735 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 BEX2Q9BXY8 128 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CHST8Q9H2A9 424 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SNTG1Q9NSN8 517 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CLN6Q9NWW5 311 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SLC6A14Q9UN76 642 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CORO2BQ9UQ03 480 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CMAHPQ9Y471 501 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CCL15-CCL14A0A0B4J2E2 113 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 TMEM229AB2RXF0 380 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 NPIPB8E9PQR5 432 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 EIF3FO00303 357 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 HLA-EP13747 358 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 POU2F1P14859 743 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 ARPP19P56211 112 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 P2RX3P56373 397 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CD83Q01151 205 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 TEAD4Q15561 434 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 CCL15Q16663 113 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 DUSP7Q16829 419 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 HKDC1Q2TB90 917 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 IFI44LQ53G44 452 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ZNF648Q5T619 568 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 FRG2Q64ET8 278 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 PLAG1Q6DJT9 500 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SIGIRRQ6IA17 410 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 GDF6Q6KF10 455 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 RGMBQ6NW40 437 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 MACC1Q6ZN28 852 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 RNF175Q8N4F7 328 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 C11orf65Q8NCR3 313 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 VANGL1Q8TAA9 524 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 UBASH3BQ8TF42 649 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 FRG2BQ96QU4 278 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ACOXLQ9NUZ1 547 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 ERVH48-1M5A8F1 160 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 SCG5P05408 212 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 ABCB1P08183 1280 aaPredicted RBP13.67□□□□□ -0.22
SRP54-202ENST00000546080 LAMP1P11279 417 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 MYL9P24844 172 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 HTR2BP41595 481 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 OR1E2P47887 323 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 ALDH9A1P49189 494 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 ARF5P84085 180 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 MGAT3Q09327 533 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 ASAH1Q13510 395 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 PTGES3Q15185 160 aaKnown RBP13.67□□□□□ -0.22
SRP54-202ENST00000546080 RGNQ15493 299 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 LRRC66Q68CR7 880 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 FAM131AQ6UXB0 335 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 RFPL4BQ6ZWI9 263 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 SLC44A2Q8IWA5 706 aaPredicted RBP13.67□□□□□ -0.22
SRP54-202ENST00000546080 BBS7Q8IWZ6 715 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 VWA5B2Q8N398 1253 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
SRP54-202ENST00000546080 MYO19Q96H55 970 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 COPS8Q99627 209 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 SEPT5Q99719 369 aaPredicted RBP13.67□□□□□ -0.22
SRP54-202ENST00000546080 DUSP26Q9BV47 211 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 HHATLQ9HCP6 504 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 GABRQQ9UN88 632 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 SLC45A1Q9Y2W3 748 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 GPSM3Q9Y4H4 160 aa13.67□□□□□ -0.22
SRP54-202ENST00000546080 YY2O15391 372 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 FZD6O60353 706 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 MPZL2O60487 215 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 SOX3P41225 446 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 MLLT3P42568 568 aaPredicted RBP13.66□□□□□ -0.22
SRP54-202ENST00000546080 SGSHP51688 502 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 DOC2BQ14184 412 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms