RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 SERPINA11Q86U17 422 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 MEX3DQ86XN8 651 aaKnown RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 OR7G3Q8NG95 312 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 OR6Q1Q8NGQ2 317 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 CENPOQ9BU64 300 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SPNS1Q9H2V7 528 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 POU2F3Q9UKI9 436 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 RAB23Q9ULC3 237 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TMEM229AB2RXF0 380 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 RTCAO00442 366 aaKnown RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 SGTAO43765 313 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SSX4O60224 188 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SOX14O95416 240 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 DLGAP3O95886 979 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 PTHP01270 115 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SOD2P04179 222 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 URODP06132 367 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 ITGAMP11215 1152 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 GPX2P18283 190 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TGFBR2P37173 567 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 DMC1Q14565 340 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 HIST2H2ACQ16777 129 aaPredicted RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 TIGD6Q17RP2 521 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 EXOC3L2Q2M3D2 409 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 ZNF697Q5TEC3 545 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 EIF3MQ7L2H7 374 aaKnown RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 SLC7A5P1Q8MH63 180 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 DSN1Q9H410 356 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 NDUFAF4Q9P032 175 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 RFPL2O75678 378 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TGM4P49221 684 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 MTA1Q13330 715 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 RFX4Q33E94 735 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 RPS26P11Q5JNZ5 115 aaPredicted RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 HEATR4Q86WZ0 1026 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 RAVER1Q8IY67 606 aaKnown RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 RASGEF1AQ8N9B8 481 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 L3MBTL4Q8NA19 623 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 POC5Q8NA72 575 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 PKP4Q99569 1192 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 KCNS3Q9BQ31 491 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 RPS6KA6Q9UK32 745 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 EXO1Q9UQ84 846 aaKnown RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 PCDHB11Q9Y5F2 797 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 A0A0G2JN53 185 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 K7ESM1 405 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 MYO1DO94832 1006 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 ALOX12P18054 663 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 HNF4AP41235 474 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 PRIM2P49643 509 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TMEM215Q68D42 235 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 SZRD1Q7Z422 152 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 RNF130Q86XS8 419 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TMEM159Q96B96 161 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 DEFB118Q96PH6 123 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 MROQ9BYG7 248 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 C14orf119Q9NWQ9 140 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 STOX2Q9P2F5 926 aaPredicted RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 NAALAD2Q9Y3Q0 740 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 BACE2Q9Y5Z0 518 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 GON4LQ3T8J9 2241 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 WASHC1A8K0Z3 465 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 SLC22A1O15245 554 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TGM5O43548 720 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 SOCS5O75159 536 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 MAPK1P28482 360 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP28-214ENST00000545540 MED22Q15528 200 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 IQCCQ4KMZ1 466 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 SYT6Q5T7P8 510 aaPredicted RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 WASH2PQ6VEQ5 465 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TSPYL5Q86VY4 417 aaPredicted RBP14.47□□□□□ -0.09
USP28-214ENST00000545540 CFAP206Q8IYR0 622 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 OVCA2Q8WZ82 227 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 GGHQ92820 318 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 OR5M11Q96RB7 305 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 ABCG4Q9H172 646 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 CTPS2Q9NRF8 586 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 TMEM45AQ9NWC5 275 aa14.47□□□□□ -0.09
USP28-214ENST00000545540 GFYI3L273 518 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 C8GP07360 202 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 TMEM220Q6QAJ8 160 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 NCCRP1Q6ZVX7 275 aaPredicted RBP14.46□□□□□ -0.09
USP28-214ENST00000545540 OR10G2Q8NGC3 310 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 WDR20Q8TBZ3 569 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 CSGALNACT1Q8TDX6 532 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 FAM210AQ96ND0 272 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 TMEM175Q9BSA9 504 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 SCN8AQ9UQD0 1980 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 OR2A25A4D2G3 310 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 SCAMP2O15127 329 aaKnown RBP14.46□□□□□ -0.09
USP28-214ENST00000545540 C9P02748 559 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 KLK1P06870 262 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 CKMT1AP12532 417 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 MESP2Q0VG99 397 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 ST3GAL4Q11206 333 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 MPPE1Q53F39 396 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 LGI4Q8N135 537 aa14.46□□□□□ -0.09
USP28-214ENST00000545540 CELF5Q8N6W0 485 aaKnown RBP14.46□□□□□ -0.09
USP28-214ENST00000545540 OR2A12Q8NGT7 310 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms