RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 RASSF1Q9NS23 344 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 KLHL42Q9P2K6 505 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 GALPQ9UBC7 116 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 NSD1Q96L73 2696 aaPredicted RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 GFYI3L273 518 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 SMAPO00193 183 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 NDUFS3O75489 264 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CATP04040 527 aaKnown RBP13.77□□□□□ -0.21
RTN3-214ENST00000545432 MYBPHQ13203 477 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 KCNJ11Q14654 390 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CEBPEQ15744 281 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 KLHL38Q2WGJ6 581 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 GXYLT1Q4G148 440 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 ACSBG2Q5FVE4 666 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 MFSD4BQ5TF39 518 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CSPG4Q6UVK1 2322 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CYHR1Q6ZMK1 362 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CNGA4Q8IV77 575 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 LRRC57Q8N9N7 239 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CAMKVQ8NCB2 501 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 PPFIBP2Q8ND30 876 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 ASB11Q8WXH4 323 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 CCDC138Q96M89 665 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 TCF12Q99081 682 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 SARGQ9BW04 601 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.21
RTN3-214ENST00000545432 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 ANKHQ9HCJ1 492 aa13.77□□□□□ -0.21
RTN3-214ENST00000545432 GOLGA6L9A6NEM1 432 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 BTNL10A8MVZ5 291 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 NIPSNAP2O75323 286 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 ESR1P03372 595 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 TPM1P09493 284 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 NR0B1P51843 470 aaKnown RBP13.76□□□□□ -0.21
RTN3-214ENST00000545432 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
RTN3-214ENST00000545432 OASLQ15646 514 aaKnown RBP13.76□□□□□ -0.21
RTN3-214ENST00000545432 PPP1R21Q6ZMI0 780 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 KCT2Q8NC54 265 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 ARSGQ96EG1 525 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 MACROD1Q9BQ69 325 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 EDARQ9UNE0 448 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 PPIEQ9UNP9 301 aaKnown RBP13.76□□□□□ -0.21
RTN3-214ENST00000545432 NAALAD2Q9Y3Q0 740 aa13.76□□□□□ -0.21
RTN3-214ENST00000545432 IGKV3D-11A0A0A0MRZ8 115 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 A0A1B0GVC2 190 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 SYCE3A1L190 88 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
RTN3-214ENST00000545432 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
RTN3-214ENST00000545432 RDH16O75452 317 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 IGHG3P01860 377 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 FHP07954 510 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 DNASE1P24855 282 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 IMPA1P29218 277 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 FMO4P31512 558 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 PEX19P40855 299 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 CLCN7P51798 805 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 RTL6Q6ICC9 239 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 ARSKQ6UWY0 536 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 QSOX2Q6ZRP7 698 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 MDGA2Q7Z553 956 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 LIX1LQ8IVB5 337 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 REXO1L1PQ8IX06 675 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 APCDD1LQ8NCL9 501 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 PPHLN1Q8NEY8 458 aaKnown RBP13.75□□□□□ -0.21
RTN3-214ENST00000545432 TBC1D20Q96BZ9 403 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 PEX11GQ96HA9 241 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
RTN3-214ENST00000545432 FAM215AQ9Y5M1 114 aa13.75□□□□□ -0.21
RTN3-214ENST00000545432 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 TCRBV16S1A1N1A0A5B0 115 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 SYT5O00445 386 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 FCHO1O14526 889 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 DNAJB6O75190 326 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 STATHP02808 62 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 MPC1LP0DKB6 136 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 ACVR2AP27037 513 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 HOXC12P31275 282 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 RFC3P40938 356 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 ZFP36L2P47974 494 aaKnown RBP13.74□□□□□ -0.21
RTN3-214ENST00000545432 SLC25A35Q3KQZ1 300 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 RNF187Q5TA31 235 aaPredicted RBP13.74□□□□□ -0.21
RTN3-214ENST00000545432 PAOXQ6QHF9 649 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 RGS9BPQ6ZS82 235 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 ADCK2Q7Z695 626 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 SLC13A3Q8WWT9 602 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
RTN3-214ENST00000545432 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
RTN3-214ENST00000545432 DEPPQ9NTK1 212 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 MED16Q9Y2X0 877 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 DUSP10Q9Y6W6 482 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms