RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ABHD13Q7L211 337 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 ZC3H7AQ8IWR0 971 aaKnown RBP14.9□□□□□ -0.02
CCDC78-216ENST00000544996 TTLQ8NG68 377 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 OR11G2Q8NGC1 345 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 OR51Q1Q8NH59 317 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 RHEBL1Q8TAI7 183 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 NT5CQ8TCD5 201 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 KCTD4Q8WVF5 259 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 TMEM79Q9BSE2 394 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 NUDT9Q9BW91 350 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 CD244Q9BZW8 370 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 PITHD1Q9GZP4 211 aaPredicted RBP14.9□□□□□ -0.02
CCDC78-216ENST00000544996 SPNS1Q9H2V7 528 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 MKL2Q9ULH7 1088 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 NAALAD2Q9Y3Q0 740 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 CCNT2O60583 730 aaKnown RBP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 DPM1O60762 260 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 KLHL18O94889 574 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 KLHL2O95198 593 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 BMP10O95393 424 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ALDOAP04075 364 aaKnown RBP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 PDGFAP04085 211 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 SERPINA6P08185 405 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ALOX12P18054 663 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ITGA3P26006 1051 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 CNTFP26441 200 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 XCR1P46094 333 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 IRF9Q00978 393 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 SLBPQ14493 270 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 FBXO48Q5FWF7 155 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 XKR6Q5GH73 641 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 LGSNQ5TDP6 509 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 MFSD4BQ5TF39 518 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 PRSS41Q7RTY9 318 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 LRRC70Q7Z2Q7 622 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 CENPLQ8N0S6 344 aaPredicted RBP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ANKRD53Q8N9V6 530 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 UHMK1Q8TAS1 419 aaKnown RBP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 METTL21AQ8WXB1 218 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ESAMQ96AP7 390 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 SEC16BQ96JE7 1060 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ATOH8Q96SQ7 321 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 SMAD5Q99717 465 aaKnown RBP14.89□□□□□ -0.03
CCDC78-216ENST00000544996 VPS11Q9H270 941 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 EHD1Q9H4M9 534 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 HCN3Q9P1Z3 774 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 C5AR2Q9P296 337 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF180Q9UJW8 692 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 FER1L5A0AVI2 2057 aa14.89□□□□□ -0.03
CCDC78-216ENST00000544996 EXOC1LA0A1B0GW35 172 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 UBXN8O00124 270 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 GALR3O60755 368 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-216ENST00000544996 RDH16O75452 317 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 HPP00738 406 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 CYC1P08574 325 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 ABHD2P08910 425 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF888P0CJ79 500 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-216ENST00000544996 IL10P22301 178 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 HPDP32754 393 aaPredicted RBP14.88□□□□□ -0.03
CCDC78-216ENST00000544996 GLRBP48167 497 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 CSRP3P50461 194 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 STXBP1P61764 594 aaKnown RBP14.88□□□□□ -0.03
CCDC78-216ENST00000544996 LAPTM5Q13571 262 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 DEFB134Q4QY38 66 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 PAGE2BQ5JRK9 111 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 FAAH2Q6GMR7 532 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 NDUFAF7Q7L592 441 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 PDSS2Q86YH6 399 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 AFAP1L2Q8N4X5 818 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 TM9SF4Q92544 642 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 PTCD3Q96EY7 689 aaKnown RBP14.88□□□□□ -0.03
CCDC78-216ENST00000544996 EFCAB11Q9BUY7 163 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 NT5DC2Q9H857 520 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 OPTCQ9UBM4 332 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 HEATR5BQ9P2D3 2071 aa14.88□□□□□ -0.03
CCDC78-216ENST00000544996 CFAP46Q8IYW2 2715 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 NSG1A0A0A6YYJ2 146 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF860A6NHJ4 632 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ANKDD1BA6NHY2 528 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 MASP2O00187 686 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ALOX12BO75342 701 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 C8orf89P0DMQ9 161 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 GFAPP14136 432 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 HNF4AP41235 474 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 SNRPNP63162 240 aaKnown RBP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 IRF8Q02556 426 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 TLE1Q04724 770 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 HIST2H2ACQ16777 129 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 HIST2H2AA3Q6FI13 130 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 PARP9Q8IXQ6 854 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 UTP15Q8TED0 518 aaKnown RBP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 UBTD2Q8WUN7 234 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 CCT6BQ92526 530 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 C8orf44Q96CB5 159 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 OR1F2PQ96R84 312 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 SLC6A16Q9GZN6 736 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms