RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FAM69BQ5VUD6 431 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 C16orf46Q6P387 395 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 PRSS41Q7RTY9 318 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 GOLGA7Q7Z5G4 137 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 TRABD2AQ86V40 505 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 PDSS2Q86YH6 399 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 TMEM151BQ8IW70 566 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 LAS2Q8IYD9 372 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 KRT78Q8N1N4 520 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 METTL27Q8N6F8 245 aaPredicted RBP18.16■□□□□ 0.5
DDX55-211ENST00000544429 TTLQ8NG68 377 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 OR2Y1Q8NGV0 311 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 PHF21BQ96EK2 531 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 ZBTB26Q9HCK0 441 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 RRAGDQ9NQL2 400 aaPredicted RBP18.16■□□□□ 0.5
DDX55-211ENST00000544429 MKS1Q9NXB0 559 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 CTSFQ9UBX1 484 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 PLAAQ9Y263 795 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 PADI2Q9Y2J8 665 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 TSC22D4Q9Y3Q8 395 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 MAU2Q9Y6X3 613 aa18.16■□□□□ 0.5
DDX55-211ENST00000544429 A0A0A6YYC8 382 aaPredicted RBP18.15■□□□□ 0.5
DDX55-211ENST00000544429 CCDC151A5D8V7 595 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 I3L1I5 382 aaPredicted RBP18.15■□□□□ 0.5
DDX55-211ENST00000544429 UGDHO60701 494 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 CLEC3AO75596 197 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 UMODP07911 640 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 KRT4P19013 534 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 EEF1DP29692 281 aaKnown RBP18.15■□□□□ 0.5
DDX55-211ENST00000544429 PIK3CGP48736 1102 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 IRF8Q02556 426 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 ZNF844Q08AG5 666 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 LAPTM5Q13571 262 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 GTF2H2Q13888 395 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 ADPRMQ3LIE5 342 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 ATP1A1-AS1Q5TC04 95 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 MLIPQ5VWP3 458 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 ADNP2Q6IQ32 1131 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 GRHL2Q6ISB3 625 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 GTF2H2CQ6P1K8 395 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 PCSK4Q6UW60 755 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 CATSPER2Q96P56 530 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 TGIF2Q9GZN2 237 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 MAP4K5Q9Y4K4 846 aa18.15■□□□□ 0.5
DDX55-211ENST00000544429 MED13Q9UHV7 2174 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 TLDC2A0PJX2 215 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 OR7A17O14581 309 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 DLX3O60479 287 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 PROCP04070 461 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 FOXL2P58012 376 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 RHDQ02161 417 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 RGS1Q08116 209 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 IFFO1Q0D2I5 559 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 ERV3-1Q14264 604 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 RBBP5Q15291 538 aaKnown RBP18.14■□□□□ 0.49
DDX55-211ENST00000544429 PAGE2BQ5JRK9 111 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 LIPJQ5W064 366 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 L3MBTL4Q8NA19 623 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 OR9A4Q8NGU2 314 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 UTP15Q8TED0 518 aaKnown RBP18.14■□□□□ 0.49
DDX55-211ENST00000544429 ZNF483Q8TF39 744 aaPredicted RBP18.14■□□□□ 0.49
DDX55-211ENST00000544429 IPPKQ9H8X2 491 aa18.14■□□□□ 0.49
DDX55-211ENST00000544429 GPN3Q9UHW5 284 aaPredicted RBP18.14■□□□□ 0.49
DDX55-211ENST00000544429 LRIT2A6NDA9 550 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 C4orf51C9J302 202 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 G3V2L1 256 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.49
DDX55-211ENST00000544429 PLIN3O60664 434 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 GALR3O60755 368 aaPredicted RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 PRKAR1AP10644 381 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 FBLP22087 321 aaKnown RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 ATP5F1P24539 256 aaPredicted RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 HNF4AP41235 474 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 CCT5P48643 541 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 HERVK_113P63132 956 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 SSPNQ14714 243 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 HERC3Q15034 1050 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 TBR1Q16650 682 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 TNFAIP8L3Q5GJ75 292 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 BEND6Q5SZJ8 279 aaPredicted RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 OR7G3Q8NG95 312 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 NACC2Q96BF6 587 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 MMABQ96EY8 250 aaPredicted RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 NSUN5Q96P11 429 aaKnown RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 NTMT1Q9BV86 223 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 ERVK-6Q9BXR3 956 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 KLHL31Q9H511 634 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 ZNF282Q9UDV7 671 aaPredicted RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 NXT1Q9UKK6 140 aaKnown RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 GRID1Q9ULK0 1009 aa18.13■□□□□ 0.49
DDX55-211ENST00000544429 PTRH2Q9Y3E5 179 aaKnown RBP18.13■□□□□ 0.49
DDX55-211ENST00000544429 H0YIV9 168 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ERVH48-1M5A8F1 160 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 CTIFO43310 598 aaKnown RBP18.12■□□□□ 0.49
DDX55-211ENST00000544429 ZGLP1P0C6A0 271 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 ALOX12P18054 663 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 IL1RNP18510 177 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 TAC1P20366 129 aa18.12■□□□□ 0.49
DDX55-211ENST00000544429 HNRNPH1P31943 449 aaKnown RBP18.12■□□□□ 0.49
DDX55-211ENST00000544429 AVPR1BP47901 424 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms