RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 FAM46CQ5VWP2 391 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF383Q8NA42 475 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 OR13A1Q8NGR1 328 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PHLDA1Q8WV24 401 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PANX3Q96QZ0 392 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 NDNQ99608 321 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF559Q9BR84 538 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 MIS12Q9H081 205 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 ZMYND12Q9H0C1 365 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 C6orf106Q9H6K1 298 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 UPF2Q9HAU5 1272 aaKnown RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 SDR39U1Q9NRG7 319 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 SLCO1C1Q9NYB5 712 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PKD2L2Q9NZM6 624 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 STX8Q9UNK0 236 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 KCPQ6ZWJ8 1503 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 PCDH11XQ9BZA7 1347 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 BCORQ6W2J9 1755 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 LOC101059948A0A1B0GTJ6 334 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 A0A1W2PS18 150 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 KBTBD13C9JR72 458 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 C16orf97H3BN30 126 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 SLC22A3O75751 556 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 OLFM2O95897 454 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 THEGLP0DJG4 465 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 HSPA5P11021 654 aaKnown RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 P4HA1P13674 534 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 HLA-DPA1P20036 260 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 DUTP33316 252 aaKnown RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 CASP3P42574 277 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 FRKP42685 505 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 ZXDBP98169 803 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 NPRL3Q12980 569 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 GAGE5Q13069 117 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 GAGE6Q13070 117 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 KEAP1Q14145 624 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 HERC3Q15034 1050 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF585BQ52M93 769 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 CCDC92Q53HC0 331 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 GET4Q7L5D6 327 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 ZSCAN30Q86W11 494 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 CNTN4Q8IWV2 1026 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 AMER3Q8N944 861 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 KBTBD8Q8NFY9 601 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 OR8H1Q8NGG4 311 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 UBLCP1Q8WVY7 318 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 GDAP1L1Q96MZ0 367 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 RHNO1Q9BSD3 238 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 OR2B2Q9GZK3 357 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 SHARPINQ9H0F6 387 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 RIMS4Q9H426 269 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 THAP9Q9H5L6 903 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 TFB2MQ9H5Q4 396 aaKnown RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 TMEM161AQ9NX61 479 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 SPHK1Q9NYA1 384 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 FBXW2Q9UKT8 454 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 RUVBL2Q9Y230 463 aaKnown RBP3.4□□□□□ -1.87
SCFD1-207ENST00000544052 KLK4Q9Y5K2 254 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 SCN7AQ01118 1682 aa3.4□□□□□ -1.87
SCFD1-207ENST00000544052 PXDNLA1KZ92 1463 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 TIAM2Q8IVF5 1701 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 IGLV9-49A0A0B4J1Y8 123 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 F8VVB4 439 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 F8VWA3 439 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 VEGFDO43915 354 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 BAG3O95817 575 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 MARK3P27448 753 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 SSTR1P30872 391 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 OR3A1P47881 315 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 NPBWR1P48145 328 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 ILF3Q12906 894 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 CBX3Q13185 183 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 SQLEQ14534 574 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 SGCBQ16585 318 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 PHKG1Q16816 387 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 SPOUT1Q5T280 376 aaKnown RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 FOXL2NBQ6ZUU3 175 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 CCDC63Q8NA47 563 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 NOA1Q8NC60 698 aaKnown RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 RNASE8Q8TDE3 154 aaKnown RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 CD101Q93033 1021 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 WBP2Q969T9 261 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 AP2M1Q96CW1 435 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 SNRNP40Q96DI7 357 aaKnown RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 ALG14Q96F25 216 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 PGM2Q96G03 612 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 ST6GAL2Q96JF0 529 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 PKP4Q99569 1192 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 ATG101Q9BSB4 218 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 HIPK2Q9H2X6 1198 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 CD93Q9NPY3 652 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 FAM207AQ9NSI2 230 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 PCDHGB1Q9Y5G3 927 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 CEP350Q5VT06 3117 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 C10orf71Q711Q0 1435 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 DICER1Q9UPY3 1922 aaKnown RBP3.39□□□□□ -1.87
SCFD1-207ENST00000544052 C5orf51A6NDU8 294 aa3.39□□□□□ -1.87
SCFD1-207ENST00000544052 C17orf105B2RV13 164 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms