RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 SH2B3Q9UQQ2 575 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 MAGEB17A8MXT2 336 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 F10P00742 488 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 SERPIND1P05546 499 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 ALOX12P18054 663 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 AHRP35869 848 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TDGF1P3P51864 188 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 CASP6P55212 293 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 MEF2AQ02078 507 aaPredicted RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 MGAT5Q09328 741 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 ZRSR2Q15696 482 aaKnown RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 MEP1AQ16819 746 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 ACER2Q5QJU3 275 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 ZNF324BQ6AW86 544 aaPredicted RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 GFRALQ6UXV0 394 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 PDSS2Q86YH6 399 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 NKAPQ8N5F7 415 aaKnown RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TBC1D20Q96BZ9 403 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 PYCR2Q96C36 320 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 PEX11GQ96HA9 241 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 VPS39Q96JC1 886 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TAAR6Q96RI8 345 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 AIF1LQ9BQI0 150 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 SEC14L3Q9UDX4 400 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 TEX264Q9Y6I9 313 aa12.37□□□□□ -0.43
RTN3-212ENST00000543123 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
RTN3-212ENST00000543123 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 CCDC188H7C350 402 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 LCMT2O60294 686 aaKnown RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 GALR3O60755 368 aaPredicted RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 GUCA1CO95843 209 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 FHP07954 510 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 IVDP26440 423 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 HNMTP50135 292 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 EFNA3P52797 238 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 RHAGQ02094 409 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 DEFB134Q4QY38 66 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 SFT2D3Q587I9 215 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ZNF766Q5HY98 468 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ZNF787Q6DD87 383 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 FRA10AC1Q70Z53 315 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 FJX1Q86VR8 437 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 LGI4Q8N135 537 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 NT5CQ8TCD5 201 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 RELTQ969Z4 430 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 CAPZA3Q96KX2 299 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 UTP23Q9BRU9 249 aaKnown RBP12.36□□□□□ -0.43
RTN3-212ENST00000543123 RUBCNLQ9H714 662 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 PELI2Q9HAT8 420 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
RTN3-212ENST00000543123 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 TTI1O43156 1089 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 ZG16O60844 167 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 SEC31AO94979 1220 aaKnown RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 UNC5CO95185 931 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 CD46P15529 392 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 COL8A1P27658 744 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 SCTRP47872 440 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 ITGA8P53708 1063 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 KCNK10P57789 538 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 OR4D2P58180 307 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 CDKL1Q00532 357 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 REEP5Q00765 189 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 C1QL3Q5VWW1 255 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 TRMT10BQ6PF06 316 aaKnown RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 SBSNQ6UWP8 590 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 TMPRSS11BQ86T26 416 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 THOC6Q86W42 341 aaKnown RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
RTN3-212ENST00000543123 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
RTN3-212ENST00000543123 ARMC2Q8NEN0 867 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms