RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 CD163Q86VB7 1156 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 SLC26A11Q86WA9 606 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 SLC13A5Q86YT5 568 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 CILP2Q8IUL8 1156 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 EID3Q8N140 333 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 FAM57AQ8TBR7 257 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 SOX13Q9UN79 622 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 CAPN6Q9Y6Q1 641 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 ARHGAP21Q5T5U3 1957 aa16.71■□□□□ 0.27
CLSTN3-214ENST00000542663 A0A1B0GTH9 108 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 CDK2AP1O14519 115 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 DNAJB6O75190 326 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 MPC1LP0DKB6 136 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 HRH2P25021 359 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 CYB561P49447 251 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 OR4D2P58180 307 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 TBPL1P62380 186 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 BASP1P80723 227 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 CEP128Q6ZU80 1094 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 KIAA1328Q86T90 577 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 CAMKVQ8NCB2 501 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 THAP11Q96EK4 314 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 OR1F2PQ96R84 312 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 TMUB1Q9BVT8 246 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 UCK2Q9BZX2 261 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 CCDC177Q9NQR7 707 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 RNF6Q9Y252 685 aa16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 DRG1Q9Y295 367 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-214ENST00000542663 PFDN6O15212 129 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 ZBTB14O43829 449 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 TOXO94900 526 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 TPOP07202 933 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 HOXB4P17483 251 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 MSX1P28360 303 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 PTGS2P35354 604 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 RFC3P40938 356 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 MEOX1P50221 254 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 ITGA8P53708 1063 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 MLF1P58340 268 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 SIX1Q15475 284 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 ASPGQ86U10 573 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 DMRTC2Q8IXT2 367 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 LILRB4Q8NHJ6 448 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 NRGNQ92686 78 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 INTS10Q9NVR2 710 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 SLC22A7Q9Y694 548 aa16.69■□□□□ 0.26
CLSTN3-214ENST00000542663 HRNRQ86YZ3 2850 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 TCRBV7S3A2A0A539 114 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 AP3B1O00203 1094 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 NADKO95544 446 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 FHP07954 510 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 IL10P22301 178 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 DNAJA1P31689 397 aaKnown RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 TRHRP34981 398 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 HLCSP50747 726 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 NR0B1P51843 470 aaKnown RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 MPP1Q00013 466 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 TTLL9Q3SXZ7 439 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 MEI1Q5TIA1 1274 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 CAPN13Q6MZZ7 669 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 SULF2Q8IWU5 870 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 ARMC10Q8N2F6 343 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 AFAP1L2Q8N4X5 818 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 POGLUT1Q8NBL1 392 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 SLC13A3Q8WWT9 602 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 KLHL42Q9P2K6 505 aa16.68■□□□□ 0.26
CLSTN3-214ENST00000542663 FAM90A27PA6NNH2 459 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 FOXO6A8MYZ6 492 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 TFECO14948 347 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 HS6ST1O60243 411 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 GALR3O60755 368 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 B3GALT4O96024 378 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 TFEBP19484 476 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 CHRNB4P30926 498 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 OLR1P78380 273 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 EMC4Q5J8M3 183 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 NEPROQ6NW34 567 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 MBOAT1Q6ZNC8 495 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 PIWIL4Q7Z3Z4 852 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 DENND6AQ8IWF6 608 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 ZNF740Q8NDX6 193 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 NFAM1Q8NET5 270 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 CD200R1Q8TD46 325 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 ASB5Q8WWX0 329 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 KCNJ9Q92806 393 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 TBC1D20Q96BZ9 403 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 DHRS7Q9Y394 339 aa16.67■□□□□ 0.26
CLSTN3-214ENST00000542663 ACANP16112 2415 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms