RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TECRLQ5HYJ1 363 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 COLEC12Q5KU26 742 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SH2D5Q6ZV89 423 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 CCDC91Q7Z6B0 441 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 PTRH1Q86Y79 214 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 ZC3H7AQ8IWR0 971 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 CYP4X1Q8N118 509 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 TCAIMQ8N3R3 496 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SNX31Q8N9S9 440 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 ZCCHC10Q8TBK6 192 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 NT5CQ8TCD5 201 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 UTP15Q8TED0 518 aaKnown RBP9.22□□□□□ -0.93
YBX3-212ENST00000542002 UBTD2Q8WUN7 234 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 MIEF2Q96C03 454 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 WDR34Q96EX3 536 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 MVB12AQ96EY5 273 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 AIF1LQ9BQI0 150 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 YIPF2Q9BWQ6 316 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SLC6A16Q9GZN6 736 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SLC25A18Q9H1K4 315 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 ADNPQ9H2P0 1102 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 MLXIPLQ9NP71 852 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 GPRC5BQ9NZH0 403 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 NUDT4Q9NZJ9 180 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 COPG2Q9UBF2 871 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 CDC14AQ9UNH5 594 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 NAALAD2Q9Y3Q0 740 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 SLC22A7Q9Y694 548 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 IKBKGQ9Y6K9 419 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 CACNA1GO43497 2377 aa9.22□□□□□ -0.93
YBX3-212ENST00000542002 A0A1W2PPM1 405 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 LRIT2A6NDA9 550 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 ZNF860A6NHJ4 632 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 H0YIG0 161 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 AGPSO00116 658 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 GALR3O60755 368 aaPredicted RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 H2AFYO75367 372 aaKnown RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 RDH16O75452 317 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 KLHL18O94889 574 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 ZNF888P0CJ79 500 aaPredicted RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 CNTFP26441 200 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 HNRNPH1P31943 449 aaKnown RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 CASP2P42575 452 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 RAB8AP61006 207 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 OLR1P78380 273 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 OCA2Q04671 838 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 PCDH1Q08174 1060 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 NFATC3Q12968 1075 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 CHIT1Q13231 466 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 RAPSNQ13702 412 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 SETDB1Q15047 1291 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 NDUFA9Q16795 377 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 DEFB134Q4QY38 66 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 XKR6Q5GH73 641 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 DCAF10Q5QP82 559 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 FAM219BQ5XKK7 198 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 TMIGD1Q6UXZ0 262 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 MED25Q71SY5 747 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.21□□□□□ -0.94
YBX3-212ENST00000542002 FDCSPQ8NFU4 85 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 OR11G2Q8NGC1 345 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 OR51Q1Q8NH59 317 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 C8orf44Q96CB5 159 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 EHD1Q9H4M9 534 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 NT5DC2Q9H857 520 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 CNOT10Q9H9A5 744 aaKnown RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 HCN3Q9P1Z3 774 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 CPSF2Q9P2I0 782 aaKnown RBP9.21□□□□□ -0.94
YBX3-212ENST00000542002 TBK1Q9UHD2 729 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 TUBD1Q9UJT1 453 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 C3orf18Q9UK00 162 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 FBXL4Q9UKA2 621 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 TP53TG5Q9Y2B4 290 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 CFAP46Q8IYW2 2715 aa9.21□□□□□ -0.94
YBX3-212ENST00000542002 A0A1B0GTL3 188 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 EIF4E1BA6NMX2 242 aaKnown RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 SYCE1LA8MT33 242 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 IDSB3KWA1 339 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 B8ZZF3 427 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 GOLGA8RI6L899 631 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 K7EPI3 171 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 E2F3O00716 465 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 PPP6CO00743 305 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 CLGNO14967 610 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 S100BP04271 92 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 SERPINA6P08185 405 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 SLC35G6P0C7Q6 338 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 COL6A2P12110 1019 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 GFAPP14136 432 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 ALOX12P18054 663 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 HSD17B3P37058 310 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 AVPR1BP47901 424 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 EMP2P54851 167 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 ALDH18A1P54886 795 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms