RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TADA1Q96BN2 335 aa8.82□□□□□ -1
THBS3-211ENST00000541990 SNX18Q96RF0 628 aa8.82□□□□□ -1
THBS3-211ENST00000541990 GDF15Q99988 308 aa8.82□□□□□ -1
THBS3-211ENST00000541990 APOL4Q9BPW4 351 aa8.82□□□□□ -1
THBS3-211ENST00000541990 GABARAPL1Q9H0R8 117 aa8.82□□□□□ -1
THBS3-211ENST00000541990 NSUN3Q9H649 340 aaKnown RBP8.82□□□□□ -1
THBS3-211ENST00000541990 TDP1Q9NUW8 608 aa8.82□□□□□ -1
THBS3-211ENST00000541990 ELOVL2Q9NXB9 296 aa8.82□□□□□ -1
THBS3-211ENST00000541990 TAS2R9Q9NYW1 312 aa8.82□□□□□ -1
THBS3-211ENST00000541990 KIF17Q9P2E2 1029 aa8.82□□□□□ -1
THBS3-211ENST00000541990 A0A1B0GVM2 712 aa8.81□□□□□ -1
THBS3-211ENST00000541990 KRT87PA6NCN2 255 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CENPBD1B2RD01 187 aa8.81□□□□□ -1
THBS3-211ENST00000541990 PRAMEF11O60813 436 aa8.81□□□□□ -1
THBS3-211ENST00000541990 NDUFS3O75489 264 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ADORA3P0DMS8 318 aa8.81□□□□□ -1
THBS3-211ENST00000541990 OGNP20774 298 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 TACR1P25103 407 aa8.81□□□□□ -1
THBS3-211ENST00000541990 SLC15A1P46059 708 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CDH4P55283 916 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF45Q02386 682 aa8.81□□□□□ -1
THBS3-211ENST00000541990 GTF2H2Q13888 395 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CCDC85BQ15834 202 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 BAK1Q16611 211 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TMEM215Q68D42 235 aa8.81□□□□□ -1
THBS3-211ENST00000541990 SIGIRRQ6IA17 410 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF544Q6NX49 715 aa8.81□□□□□ -1
THBS3-211ENST00000541990 GTF2H2CQ6P1K8 395 aa8.81□□□□□ -1
THBS3-211ENST00000541990 NEK5Q6P3R8 708 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TUBA3EQ6PEY2 450 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TTC23LQ6PF05 361 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF438Q7Z4V0 828 aa8.81□□□□□ -1
THBS3-211ENST00000541990 NLRP8Q86W28 1048 aa8.81□□□□□ -1
THBS3-211ENST00000541990 FAM217AQ8IXS0 508 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CACTIN-AS1Q8N1I8 211 aa8.81□□□□□ -1
THBS3-211ENST00000541990 UBE2J2Q8N2K1 259 aa8.81□□□□□ -1
THBS3-211ENST00000541990 AADATQ8N5Z0 425 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF675Q8TD23 568 aa8.81□□□□□ -1
THBS3-211ENST00000541990 GGHQ92820 318 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TRNT1Q96Q11 434 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 OR5M11Q96RB7 305 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CINPQ9BW66 212 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 MAGIXQ9H6Y5 334 aa8.81□□□□□ -1
THBS3-211ENST00000541990 IPPKQ9H8X2 491 aa8.81□□□□□ -1
THBS3-211ENST00000541990 DKK3Q9UBP4 350 aa8.81□□□□□ -1
THBS3-211ENST00000541990 UBA2Q9UBT2 640 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 NUFIP1Q9UHK0 495 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 DLGAP4Q9Y2H0 992 aa8.81□□□□□ -1
THBS3-211ENST00000541990 PATJQ8NI35 1801 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZSCAN5BA6NJL1 495 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CENPXA8MT69 81 aa8.81□□□□□ -1
THBS3-211ENST00000541990 FAM220BPB1ANY3 271 aa8.81□□□□□ -1
THBS3-211ENST00000541990 LOC110117498-PIK3R3F6TDL0 507 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CAPN5O15484 640 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 MED26O95402 600 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ENDOUP21128 410 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 IGFBP4P22692 258 aa8.81□□□□□ -1
THBS3-211ENST00000541990 SLC6A11P48066 632 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF140P52738 457 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 METAP1P53582 386 aa8.81□□□□□ -1
THBS3-211ENST00000541990 UGT2B15P54855 530 aa8.81□□□□□ -1
THBS3-211ENST00000541990 P2RX3P56373 397 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TUBA1BP68363 451 aa8.81□□□□□ -1
THBS3-211ENST00000541990 NPRL3Q12980 569 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CAMK2GQ13555 558 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 PROX2Q3B8N5 592 aa8.81□□□□□ -1
THBS3-211ENST00000541990 DOK6Q6PKX4 331 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ZNF517Q6ZMY9 492 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 Q6ZNB5 142 aa8.81□□□□□ -1
THBS3-211ENST00000541990 MBOAT1Q6ZNC8 495 aa8.81□□□□□ -1
THBS3-211ENST00000541990 RFLNAQ6ZTI6 216 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TUBA1AQ71U36 451 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CCDC190Q86UF4 302 aa8.81□□□□□ -1
THBS3-211ENST00000541990 AMER2Q8N7J2 671 aa8.81□□□□□ -1
THBS3-211ENST00000541990 PHOSPHO2Q8TCD6 241 aa8.81□□□□□ -1
THBS3-211ENST00000541990 BRSK1Q8TDC3 778 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CITED4Q96RK1 184 aa8.81□□□□□ -1
THBS3-211ENST00000541990 MTIF3Q9H2K0 278 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 THUMPD1Q9NXG2 353 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 FKBPLQ9UIM3 349 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TRMT6Q9UJA5 497 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
THBS3-211ENST00000541990 MN1Q10571 1320 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
THBS3-211ENST00000541990 H3BM21 787 aa8.81□□□□□ -1
THBS3-211ENST00000541990 PLK4O00444 970 aa8.81□□□□□ -1
THBS3-211ENST00000541990 GFRA2O00451 464 aa8.81□□□□□ -1
THBS3-211ENST00000541990 KIAA0513O60268 411 aa8.81□□□□□ -1
THBS3-211ENST00000541990 CRYZL1O95825 349 aa8.81□□□□□ -1
THBS3-211ENST00000541990 RPLP0P05388 317 aaKnown RBP8.81□□□□□ -1
THBS3-211ENST00000541990 PTPN6P29350 595 aa8.81□□□□□ -1
THBS3-211ENST00000541990 SOX9P48436 509 aa8.81□□□□□ -1
THBS3-211ENST00000541990 DGKEP52429 567 aa8.81□□□□□ -1
THBS3-211ENST00000541990 LIMK1P53667 647 aa8.81□□□□□ -1
THBS3-211ENST00000541990 PARP15Q460N3 678 aa8.81□□□□□ -1
THBS3-211ENST00000541990 ARMCX4Q5H9R4 360 aa8.81□□□□□ -1
THBS3-211ENST00000541990 DGKKQ5KSL6 1271 aa8.81□□□□□ -1
THBS3-211ENST00000541990 TSPYL5Q86VY4 417 aaPredicted RBP8.81□□□□□ -1
THBS3-211ENST00000541990 RGL4Q8IZJ4 473 aa8.81□□□□□ -1
THBS3-211ENST00000541990 FGF13Q92913 245 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms