RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ZCCHC18P0CG32 403 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 HNRNPA2B1P22626 353 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 PSMA5P28066 241 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 KCNJ4P48050 445 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SLC6A12P48065 614 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 KRT6CP48668 564 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 HUNKP57058 714 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 RPL36AP83881 106 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 RUNX1T1Q06455 604 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 CETN1Q12798 172 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 RIPK1Q13546 671 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 NONOQ15233 471 aaKnown RBP eCLIP4.83□□□□□ -1.64
CIT-211ENST00000541841 FAM109BQ6ICB4 259 aaPredicted RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 RGMBQ6NW40 437 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 ARHGAP11AQ6P4F7 1023 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 CES3Q6UWW8 571 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.83□□□□□ -1.64
CIT-211ENST00000541841 AMIGO1Q86WK6 493 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 COMMD2Q86X83 199 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 FAM133AQ8N9E0 248 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 CLEC18CQ8NCF0 446 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SAP25Q8TEE9 199 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SLC38A5Q8WUX1 472 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 ANP32BQ92688 251 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 FRAT1Q92837 279 aaPredicted RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 MTERF1Q99551 399 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 C17orf62Q9BQA9 187 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 BTBD10Q9BSF8 475 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 EDEM2Q9BV94 578 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 CDK19Q9BWU1 502 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 IDI2Q9BXS1 227 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 PRRG4Q9BZD6 226 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 PUS3Q9BZE2 481 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 TMEM117Q9H0C3 514 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 C6orf106Q9H6K1 298 aaPredicted RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 GORASP2Q9H8Y8 452 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SERINC1Q9NRX5 453 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 LRWD1Q9UFC0 647 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SNX6Q9UNH7 406 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 RUVBL2Q9Y230 463 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 SH3GLB1Q9Y371 365 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 KLK4Q9Y5K2 254 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 SRPRBQ9Y5M8 271 aaKnown RBP4.83□□□□□ -1.64
CIT-211ENST00000541841 ABCA9Q8IUA7 1624 aa4.83□□□□□ -1.64
CIT-211ENST00000541841 PZPP20742 1482 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CGNL1Q0VF96 1302 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CASTOR2A6NHX0 329 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SLC28A1O00337 649 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 E2F3O00716 465 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SLC22A2O15244 555 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CLDN3O15551 220 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 ADAM12O43184 909 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 PSMD3O43242 534 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 TSC22D2O75157 780 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 GMNNO75496 209 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 RPS6KA5O75582 802 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SPAG6O75602 509 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 PPP1R3DO95685 299 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SP9P0CG40 484 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 ACP2P11117 423 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SFTPCP11686 197 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 GNLYP22749 145 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 GLRA2P23416 452 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SSTR1P30872 391 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 RPL3P39023 403 aaKnown RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 NKX2-1P43699 371 aaPredicted RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 RASGEF1BQ0VAM2 473 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 ILF2Q12905 390 aaKnown RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 PDZK1IP1Q13113 114 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 GPM6BQ13491 265 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 WDR43Q15061 677 aaKnown RBP eCLIP4.82□□□□□ -1.64
CIT-211ENST00000541841 ACKR1Q16570 336 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CA9Q16790 459 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 ZNF770Q6IQ21 691 aaPredicted RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 ARSKQ6UWY0 536 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 TMEM26Q6ZUK4 368 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 ADGRD2Q7Z7M1 963 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 TMPRSS12Q86WS5 348 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 MAP7D3Q8IWC1 876 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 STHQ8IWL8 128 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CHERPQ8IWX8 916 aaKnown RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 OR52B4Q8NGK2 314 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 WFIKKN2Q8TEU8 576 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 PPP4R1Q8TF05 950 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 DNAAF4Q8WXU2 420 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 CTNNBL1Q8WYA6 563 aaPredicted RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 FAM71F1Q96KD3 344 aaPredicted RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 TTC25Q96NG3 672 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 TRMT61BQ9BVS5 477 aaKnown RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 UBQLN3Q9H347 655 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 Q9H8V8 135 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 VPS37BQ9H9H4 285 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.82□□□□□ -1.64
CIT-211ENST00000541841 SMPD3Q9NY59 655 aaPredicted RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 CNOT2Q9NZN8 540 aaKnown RBP4.82□□□□□ -1.64
CIT-211ENST00000541841 KCNJ14Q9UNX9 436 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 PAM16Q9Y3D7 125 aa4.82□□□□□ -1.64
CIT-211ENST00000541841 TRPM1Q7Z4N2 1603 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms