RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C5orf22Q49AR2 442 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 BBS7Q8IWZ6 715 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 KIAA1958Q8N8K9 716 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 ARL14EPQ8N8R7 260 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 IL17RDQ8NFM7 739 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 MMP27Q9H306 513 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 TIGARQ9NQ88 270 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 SPASTQ9UBP0 616 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 DUSP12Q9UNI6 340 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 SZT2Q5T011 3432 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 LOC110117498-PIK3R3F6TDL0 507 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 DYRK3O43781 588 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 GPX5O75715 221 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 RPLP0P05388 317 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 HMGA1P17096 107 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 GPX2P18283 190 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 GGT2P36268 569 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 FLT3LGP49771 235 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 ELP6Q0PNE2 266 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 FADDQ13158 208 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 CDKN3Q16667 212 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 LRRC26Q2I0M4 334 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 ATAD3CQ5T2N8 411 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 CERS6Q6ZMG9 384 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 OLIG3Q7RTU3 272 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 MINDY2Q8NBR6 621 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 NFKBIDQ8NI38 313 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 GPR151Q8TDV0 419 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 TP53INP1Q96A56 240 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 ASIC4Q96FT7 647 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 CMTM7Q96FZ5 175 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 PITX2Q99697 317 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 CPNE5Q9HCH3 593 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMEM45AQ9NWC5 275 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 TBC1D14Q9P2M4 693 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 RPS6KA6Q9UK32 745 aa9.98□□□□□ -0.81
CDC42SE1-207ENST00000540998 SCN8AQ9UQD0 1980 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 GNG14A0A1W2PPG7 69 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 HAT1O14929 419 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 MYCP01106 439 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CSF2P04141 144 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PBLDP30039 288 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CD70P32970 193 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SLAMF1Q13291 335 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CRHR2Q13324 411 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SSX1Q16384 188 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 BAK1Q16611 211 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 INO80DQ53TQ3 878 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 C10orf62Q5T681 223 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CST9Q5W186 159 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 GLCCI1Q86VQ1 547 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 GALNT13Q8IUC8 556 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 LAX1Q8IWV1 398 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SYNPOQ8N3V7 929 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 AMER2Q8N7J2 671 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMEM203Q969S6 136 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 TESCQ96BS2 214 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 DUSP26Q9BV47 211 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 BARHL1Q9BZE3 327 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 IMPAD1Q9NX62 359 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 DNAJC27Q9NZQ0 273 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 Q9Y3F1 56 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCM1Q15154 2024 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRAMEF33A0A0G2JMD5 474 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRAMEF10O60809 474 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRPS2P11908 318 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SPAM1P38567 509 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 BDKRB1P46663 353 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 HNRNPFP52597 415 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR2B6P58173 313 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PFN3P60673 137 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CDC20Q12834 499 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 RGNQ15493 299 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 TAF12Q16514 161 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRSS53Q2L4Q9 553 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 TTLL9Q3SXZ7 439 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF605Q86T29 641 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 C2orf73Q8N5S3 287 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR4A15Q8NGL6 344 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 WDR36Q8NI36 951 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SORBS1Q9BX66 1292 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CEP44Q9C0F1 390 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SP140LQ9H930 580 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 CCNB1IP1Q9NPC3 277 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 SH2B3Q9UQQ2 575 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 PLXND1Q9Y4D7 1925 aa9.97□□□□□ -0.81
CDC42SE1-207ENST00000540998 MYO10Q9HD67 2058 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 SYN3O14994 580 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 IDH3BO43837 385 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF821O75541 412 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 PTGER1P34995 402 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF157P51786 506 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 UGT2B15P54855 530 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms