RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	INPP5J	Q15735	1006 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-215	ENST00000540987	IGFL2	Q6UWQ7	119 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	CLEC18B	Q6UXF7	455 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	NDUFAF7	Q7L592	441 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	CUZD1	Q86UP6	607 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	CLEC18C	Q8NCF0	446 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	OR51Q1	Q8NH59	317 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	UBXN10	Q96LJ8	280 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	FAM129A	Q9BZQ8	928 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	ZNF700	Q9H0M5	742 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	DMGDH	Q9UI17	866 aa	Known RBP	12.89	□□□□□ -0.35
POLE-215	ENST00000540987	ZFP69B	Q9UJL9	534 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	B3GNT3	Q9Y2A9	372 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	CPAMD8	Q8IZJ3	1885 aa		12.89	□□□□□ -0.35
POLE-215	ENST00000540987	NSG1	A0A0A6YYJ2	146 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	KLHL41	O60662	606 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	GALR3	O60755	368 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PRAMEF4	O60810	478 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SERPIND1	P05546	499 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PRR35	P0CG20	571 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	ZNF888	P0CJ79	500 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SLC35E2B	P0CK96	405 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SPR	P35270	261 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SOX11	P35716	441 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	HNMT	P50135	292 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	OLR1	P78380	273 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	NAB1	Q13506	487 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PWP1	Q13610	501 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	BMPR2	Q13873	1038 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	CRB2	Q5IJ48	1285 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	GRTP1	Q5TC63	336 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	AGAP7P	Q5VUJ5	663 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PRAMEF9	Q5VWM5	478 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SLCO4C1	Q6ZQN7	724 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987		Q6ZS92	163 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	MMGT1	Q8N4V1	131 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	CREB3L4	Q8TEY5	395 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PSMF1	Q92530	271 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	ZNF592	Q92610	1267 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	C19orf60	Q96EN9	201 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	VPS50	Q96JG6	964 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	AGAP4	Q96P64	663 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	WDR77	Q9BQA1	342 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	AIF1L	Q9BQI0	150 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SLC6A16	Q9GZN6	736 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	SLAMF7	Q9NQ25	335 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	LANCL2	Q9NS86	450 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	RIC8B	Q9NVN3	520 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	WWOX	Q9NZC7	414 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	NINJ2	Q9NZG7	142 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	ASB1	Q9Y576	335 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	PCDHGA10	Q9Y5H3	936 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	KCNE2	Q9Y6J6	123 aa		12.88	□□□□□ -0.35
POLE-215	ENST00000540987	USP9X	Q93008	2570 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-215	ENST00000540987	IGHV3-20	A0A0C4DH32	117 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	HMX2	A2RU54	273 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	SERPINA7	P05543	415 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	C8orf89	P0DMQ9	161 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ALOX12	P18054	663 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	GNLY	P22749	145 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	CXCR2	P25025	360 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ECHS1	P30084	290 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	AHR	P35869	848 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	KCNC1	P48547	511 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	HSPA7	P48741	367 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ATP6V0D1	P61421	351 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	RHAG	Q02094	409 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	RGS1	Q08116	209 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	CDC16	Q13042	620 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	MFAP5	Q13361	173 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	SLBP	Q14493	270 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
POLE-215	ENST00000540987	HERC3	Q15034	1050 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	MINDY4	Q4G0A6	757 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	DEFB134	Q4QY38	66 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	MFSD4B	Q5TF39	518 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	IRAK1BP1	Q5VVH5	260 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	LINC00696	Q6ZRV3	163 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ATCAY	Q86WG3	371 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	GPSM1	Q86YR5	675 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	KBTBD2	Q8IY47	623 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	IQCK	Q8N0W5	287 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ZADH2	Q8N4Q0	377 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	TBC1D19	Q8N5T2	526 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	EFCAB3	Q8N7B9	438 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	PDPR	Q8NCN5	879 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	GALNT11	Q8NCW6	608 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	BRIX1	Q8TDN6	353 aa	Known RBP	12.87	□□□□□ -0.35
POLE-215	ENST00000540987	UTP15	Q8TED0	518 aa	Known RBP	12.87	□□□□□ -0.35
POLE-215	ENST00000540987	PPP4R1	Q8TF05	950 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	TM9SF4	Q92544	642 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	EXT2	Q93063	718 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	TSLP	Q969D9	159 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	KIAA1191	Q96A73	305 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ESAM	Q96AP7	390 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	PEX11G	Q96HA9	241 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	IMMP1L	Q96LU5	166 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-215	ENST00000540987	KLHL31	Q9H511	634 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	IGSF5	Q9NSI5	407 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms