RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PRSS35Q8N3Z0 413 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 NME8Q8N427 588 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 RBM41Q96IZ5 413 aaKnown RBP4.85□□□□□ -1.63
YBX3-210ENST00000540975 CNDP2Q96KP4 475 aaKnown RBP4.85□□□□□ -1.63
YBX3-210ENST00000540975 FER1L6-AS2Q96M78 137 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 CLIC5Q9NZA1 410 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 POMT2Q9UKY4 750 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 SNX7Q9UNH6 387 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 NEDD4P46934 1319 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 F8VVB4 439 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 F8VWA3 439 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 CCDC188H7C350 402 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 RTCAO00442 366 aaKnown RBP4.84□□□□□ -1.63
YBX3-210ENST00000540975 OXTRP30559 389 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 CDX1P47902 265 aaPredicted RBP4.84□□□□□ -1.63
YBX3-210ENST00000540975 ERVK-16P61578 105 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 C1orf141Q5JVX7 400 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 CDHR3Q6ZTQ4 885 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 C5orf24Q7Z6I8 188 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 PRUNE1Q86TP1 453 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 SLC47A2Q86VL8 602 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 SLC22A15Q8IZD6 547 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 CCAR2Q8N163 923 aaKnown RBP4.84□□□□□ -1.63
YBX3-210ENST00000540975 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 ZNF577Q9BSK1 485 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 HEXA-AS1Q9H8Q6 139 aa4.84□□□□□ -1.63
YBX3-210ENST00000540975 ACOD1A6NK06 481 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 ANXA2P2A6NMY6 339 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 A8MVM7 634 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 SRRM5B3KS81 715 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 TMEM150CB9EJG8 249 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 RNF103O00237 685 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 MAGEB2O15479 319 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 ETV5P41161 510 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 TNK1Q13470 666 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 UGCGQ16739 394 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 LRRC73Q5JTD7 316 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 IQUBQ8NA54 791 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 Q8NFD4 153 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 SLC26A7Q8TE54 656 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.83□□□□□ -1.64
YBX3-210ENST00000540975 RAD54LQ92698 747 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 CASP10Q92851 521 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 IL12RB2Q99665 862 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 CHCHD5Q9BSY4 110 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 NLGN3Q9NZ94 848 aa4.83□□□□□ -1.64
YBX3-210ENST00000540975 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 IGHV3-20A0A0C4DH32 117 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 TRAFD1O14545 582 aaPredicted RBP4.82□□□□□ -1.64
YBX3-210ENST00000540975 SPP1P10451 314 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 SELEP16581 610 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 PTAFRP25105 342 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 CLCN4P51793 760 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 CLDN17P56750 224 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 ZNF146Q15072 292 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
YBX3-210ENST00000540975 MOXD1Q6UVY6 613 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 PHC2Q8IXK0 858 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 KIF18AQ8NI77 898 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 OCC1Q8TAD7 63 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 POLKQ9UBT6 870 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 SLC12A6Q9UHW9 1150 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 AGTPBP1Q9UPW5 1226 aa4.82□□□□□ -1.64
YBX3-210ENST00000540975 AGRNO00468 2067 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 TRAV18A0A075B6X5 111 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 hCG_38984A0A1B0GV85 526 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 H3BMM5 538 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 ITIH1P19827 911 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 LIMK2P53671 638 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 IL10RBQ08334 325 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 SLC25A30Q5SVS4 291 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 DHRS11Q6UWP2 260 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 RPP25Q9BUL9 199 aaKnown RBP4.81□□□□□ -1.64
YBX3-210ENST00000540975 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
YBX3-210ENST00000540975 C10orf88Q9H8K7 445 aa4.81□□□□□ -1.64
YBX3-210ENST00000540975 IARS2Q9NSE4 1012 aaKnown RBP4.81□□□□□ -1.64
YBX3-210ENST00000540975 NFKBIL1Q9UBC1 381 aaPredicted RBP4.81□□□□□ -1.64
YBX3-210ENST00000540975 IQCMA0A1B0GVH7 501 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 NKX6-3A6NJ46 265 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 HOXD4P09016 255 aaPredicted RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 FDPSP14324 419 aaKnown RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 IL4RP24394 825 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 CRKLP46109 303 aaKnown RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 ZNF41P51814 821 aaPredicted RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 NDST2P52849 883 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 FKBP3Q00688 224 aaKnown RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 ZFP36L1Q07352 338 aaKnown RBP4.8□□□□□ -1.64
YBX3-210ENST00000540975 FCHO2Q0JRZ9 810 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 BTNL8Q6UX41 500 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 SLC39A11Q8N1S5 342 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 RPLP0P6Q8NHW5 317 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 ZNF597Q96LX8 424 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 SERINC2Q96SA4 455 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 RARRES3Q9UL19 164 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 COLEC10Q9Y6Z7 277 aa4.8□□□□□ -1.64
YBX3-210ENST00000540975 RNF123Q5XPI4 1314 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 PRSS46E5RG02 174 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms