RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 C5orf34Q96MH7 638 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 CYTH2Q99418 400 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 EHD1Q9H4M9 534 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 MRPS33Q9Y291 106 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SNX24Q9Y343 169 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 PCDHGB6Q9Y5F9 930 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 A0A1B0GUH1 482 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 MAGEB17A8MXT2 336 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 TCP11X1B4DZS4 312 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 CLDN4O14493 209 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 KLHL18O94889 574 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SERPIND1P05546 499 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SERPINA6P08185 405 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SERPINB1P30740 379 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 PHBP35232 272 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 GP5P40197 560 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 TIAL1Q01085 375 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 EEF1A2Q05639 463 aaKnown RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 RBPJQ06330 500 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 USP10Q14694 798 aaKnown RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NR6A1Q15406 480 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NSDHLQ15738 373 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 HP1BP3Q5SSJ5 553 aaPredicted RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 GRTP1Q5TC63 336 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SULT1C3Q6IMI6 304 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 MTFR2Q6P444 385 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 TRMT10BQ6PF06 316 aaKnown RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NXPE4Q6UWF7 544 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SBSNQ6UWP8 590 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 LINC00696Q6ZRV3 163 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 C3orf62Q6ZUJ4 267 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 VN1R4Q7Z5H5 301 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 THOC6Q86W42 341 aaKnown RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 IGDCC3Q8IVU1 814 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 ARHGEF39Q8N4T4 335 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 PLPP5Q8NEB5 264 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 TBC1D20Q96BZ9 403 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 MAGEB10Q96LZ2 347 aaPredicted RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 BARD1Q99728 777 aaKnown RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 TRIM51Q9BSJ1 452 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NPLQ9BXD5 320 aaPredicted RBP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 ROGDIQ9GZN7 287 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 VN1R1Q9GZP7 353 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NT5DC2Q9H857 520 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 SAYSD1Q9NPB0 183 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 OLAHQ9NV23 265 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 ASF1BQ9NVP2 202 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 STMN3Q9NZ72 180 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 PTGFRNQ9P2B2 879 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 NAALAD2Q9Y3Q0 740 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 CNTRLQ7Z7A1 2325 aa9.82□□□□□ -0.84
CDCA3-208ENST00000540683 FEZF1A0PJY2 475 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 BLACEA4D250 179 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 ANKDD1BA6NHY2 528 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 USP27XA6NNY8 438 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 SYCE1LA8MT33 242 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 P2RX6O15547 441 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 GALR3O60755 368 aaPredicted RBP9.81□□□□□ -0.84
CDCA3-208ENST00000540683 BANF1O75531 89 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 MED26O95402 600 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 FHP07954 510 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 RNH1P13489 461 aaKnown RBP9.81□□□□□ -0.84
CDCA3-208ENST00000540683 IL1RNP18510 177 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 CRABP2P29373 138 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 SOX11P35716 441 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 SCTRP47872 440 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 TNFSF10P50591 281 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 CASP6P55212 293 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 ABRAXAS2Q15018 415 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 RBBP5Q15291 538 aaKnown RBP9.81□□□□□ -0.84
CDCA3-208ENST00000540683 MEP1AQ16819 746 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 PPP1R3AQ16821 1122 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 BTBD16Q32M84 506 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 FAAH2Q6GMR7 532 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 KLC3Q6P597 504 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 TMIGD1Q6UXZ0 262 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 QSOX2Q6ZRP7 698 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 TBC1D1Q86TI0 1168 aaPredicted RBP9.81□□□□□ -0.84
CDCA3-208ENST00000540683 CUZD1Q86UP6 607 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 LAPTM4BQ86VI4 370 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 PLD3Q8IV08 490 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 AFAP1L2Q8N4X5 818 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 MNS1Q8NEH6 495 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 OR1N1Q8NGS0 311 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 ZCCHC10Q8TBK6 192 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 STAG3L4Q8TBR4 150 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 BRIX1Q8TDN6 353 aaKnown RBP9.81□□□□□ -0.84
CDCA3-208ENST00000540683 FAR1Q8WVX9 515 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 NEIL2Q969S2 332 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 PYCR2Q96C36 320 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 C8orf44Q96CB5 159 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 CENPKQ9BS16 269 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 EFCAB11Q9BUY7 163 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 KCNK13Q9HB14 408 aa9.81□□□□□ -0.84
CDCA3-208ENST00000540683 NMRAL1Q9HBL8 299 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms