RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 DNASE2O00115 360 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 GPX5O75715 221 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 PTHP01270 115 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 RPS19P39019 145 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 DAPP51397 102 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 CSHL1Q14406 222 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 NOMO2Q5JPE7 1267 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 CNKSR3Q6P9H4 555 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 TMCO2Q7Z6W1 182 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 ABI3BPQ7Z7G0 1075 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 DNAAF3Q8N9W5 541 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 ATG16L2Q8NAA4 619 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 BTN2A2Q8WVV5 523 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 MYO19Q96H55 970 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 PPM1MQ96MI6 270 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 CYP2S1Q96SQ9 504 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 MAGEB5Q9BZ81 275 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 PIGUQ9H490 435 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 SDHAF3Q9NRP4 125 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 LYARQ9NX58 379 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 KCTD5Q9NXV2 234 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 COPZ2Q9P299 210 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 ADAM30Q9UKF2 790 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 LRFN2Q9ULH4 789 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 BTRCQ9Y297 605 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 RPH3AQ9Y2J0 694 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 CMAHPQ9Y471 501 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 SESN1Q9Y6P5 492 aa9.15□□□□□ -0.94
CTNNA1-243ENST00000540387 KRBOX1C9JBD0 128 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 B3GAT3O94766 335 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 NMBRP28336 390 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 SSTR2P30874 369 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 TAF6P49848 677 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 TAS2R39P59534 338 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 C2orf80Q0P641 193 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 UPP1Q16831 310 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 GPR33Q49SQ1 333 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 LCN1P1Q5VSP4 162 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 KIAA0319Q5VV43 1072 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 ERICH5Q6P6B1 374 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 ATRAIDQ6UW56 229 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 DET1Q7L5Y6 550 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 ZZZ3Q8IYH5 903 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 STPG2Q8N412 459 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 PGBD5Q8N414 524 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 OR52N1Q8NH53 320 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 TWIST2Q8WVJ9 160 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 MYLPFQ96A32 169 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 ZC3HAV1LQ96H79 300 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 MYOCQ99972 504 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 P2RY13Q9BPV8 354 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 GORASP2Q9H8Y8 452 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 AMBNQ9NP70 447 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 OLA1Q9NTK5 396 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 RBFOX1Q9NWB1 397 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 ACTR10Q9NZ32 417 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 PSORS1C1Q9UIG5 152 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 EDARQ9UNE0 448 aa9.15□□□□□ -0.95
CTNNA1-243ENST00000540387 SCN1AP35498 2009 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 UBA6A0AVT1 1052 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 PQLC2LA1A4F0 135 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SH3D21A4FU49 640 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FABP12A6NFH5 140 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 OR6C65A6NJZ3 312 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CBX4O00257 560 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 GSTA4O15217 222 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ORC5O43913 435 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC43A1O75387 559 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM157BP0CG42 384 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SYN1P17600 705 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SSTR4P31391 388 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 TGM4P49221 684 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF81P51508 661 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 UFM1P61960 85 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ABATP80404 500 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 IFRD2Q12894 506 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ADAM15Q13444 863 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 TUSC3Q13454 348 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MADCAM1Q13477 382 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FCN2Q15485 313 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SGCAQ16586 387 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SOWAHAQ2M3V2 549 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 NADSYN1Q6IA69 706 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 C16orf59Q7L2K0 433 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 OTOP2Q7RTS6 562 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 C7orf61Q8IZ16 206 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 HASPINQ8TF76 798 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 BADQ92934 168 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MYDGFQ969H8 173 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 P2RY11Q96G91 374 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CASD1Q96PB1 797 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms