RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TP53BP2Q13625 1128 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SETMARQ53H47 684 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 YIF1BQ5BJH7 314 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 ZNF678Q5SXM1 525 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 LILRA6Q6PI73 481 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 KCTD20Q7Z5Y7 419 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 TP53I13Q8NBR0 393 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 ASB15Q8WXK1 588 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 YIPF6Q96EC8 236 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 HYLS1Q96M11 299 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 B3GNT2Q9NY97 397 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SSR3Q9UNL2 185 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 MRPS7Q9Y2R9 242 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 CLCA3PQ9Y6N3 262 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 A3GALT2U3KPV4 340 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 A0A1W2PQ09 198 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 M0QZQ0 153 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 DFNA5O60443 496 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 BEST1O76090 585 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 GSTM1P09488 218 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 CYP2A6P11509 494 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 HOXB6P17509 224 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 DRD1P21728 446 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 UGT2B10P36537 528 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SCNN1AP37088 669 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SOX9P48436 509 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 DGKQP52824 942 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 EMX2Q04743 252 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 FADDQ13158 208 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SNAPC1Q16533 368 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 DPY19L1Q2PZI1 675 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 SERPINA13PQ6UXR4 307 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 PTRH1Q86Y79 214 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 WDR36Q8NI36 951 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 STAG3L4Q8TBR4 150 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 ASB12Q8WXK4 309 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 ZNF707Q96C28 371 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 TPD52L3Q96J77 140 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 MAGEB10Q96LZ2 347 aaPredicted RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 CYP2S1Q96SQ9 504 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 PPA2Q9H2U2 334 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 FARSBQ9NSD9 589 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 CATSPERZQ9NTU4 200 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 ABCB8Q9NUT2 735 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 OAS3Q9Y6K5 1087 aaKnown RBP8.4□□□□□ -1.06
DDB1-217ENST00000540166 KNL1Q8NG31 2342 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 C19orf67A6NJJ6 358 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 DCLK1O15075 740 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 AP2A2O94973 939 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 TNFSF8P32971 234 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 BTN1A1Q13410 526 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 CDH18Q13634 790 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 PKDCCQ504Y2 493 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 PIK3R6Q5UE93 754 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 KIAA1614Q5VZ46 1190 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 MRNIPQ6NTE8 343 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 TSSK4Q6SA08 328 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 DGLUCYQ7Z3D6 616 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 NPWQ8N729 165 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 DCBLD1Q8N8Z6 715 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 TTC9Q92623 222 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 METTL2AQ96IZ6 378 aaKnown RBP8.4□□□□□ -1.07
DDB1-217ENST00000540166 ASB16Q96NS5 453 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 PPP1R2P1Q96PQ5 205 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 MCMBPQ9BTE3 642 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 RPP25Q9BUL9 199 aaKnown RBP8.4□□□□□ -1.07
DDB1-217ENST00000540166 KIFC1Q9BW19 673 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 VN1R3Q9BXE9 311 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 ALOXE3Q9BYJ1 711 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 CRISPLD1Q9H336 500 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 PRDM8Q9NQV8 689 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 ZSCAN32Q9NX65 697 aa8.4□□□□□ -1.07
DDB1-217ENST00000540166 FAM92AA1XBS5 289 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PIPSLA2A3N6 862 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PIRO00625 290 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SSX4O60224 188 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 NDUFS3O75489 264 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 EEDO75530 441 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 CDK14O94921 469 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 NPPAP01160 153 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 HTR1AP08908 422 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 CD86P42081 329 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SRP54P61011 504 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 CXCR4P61073 352 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ERVK-8P63133 956 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 TSTQ16762 297 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 MARC1Q5VT66 337 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ZZZ3Q8IYH5 903 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SLC22A15Q8IZD6 547 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SLC34A3Q8N130 599 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms