RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TLR4O00206 839 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 FKBP6O75344 327 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 KRT36O76013 467 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 VIPP01282 170 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CSF2P04141 144 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CHRM5P08912 532 aaPredicted RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 NME1P15531 152 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 TACR1P25103 407 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 GRK3P35626 688 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 UBE2IP63279 158 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 SPIDRQ14159 915 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 VN1R5Q7Z5H4 357 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 TAF8Q7Z7C8 310 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 METTL4Q8N3J2 472 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 TBC1D19Q8N5T2 526 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 PRSS33Q8NF86 280 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 OR2L3Q8NG85 312 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 HSPA12BQ96MM6 686 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 PRAP1Q96NZ9 151 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 SARGQ9BW04 601 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 SRMSQ9H3Y6 488 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 OCEL1Q9H607 264 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 AHSPQ9NZD4 102 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 APOBEC3BQ9UH17 382 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 INVSQ9Y283 1065 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 WNT1P04628 370 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 UBTFL6P0CB48 400 aaPredicted RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 JUNDP17535 347 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 SLC6A2P23975 617 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 PEBP1P30086 187 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 SLC7A2P52569 658 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 DGKQP52824 942 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 YBX1P67809 324 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 RAE1P78406 368 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 SRSF11Q05519 484 aaKnown RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 CBX3Q13185 183 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 KIR2DS3Q14952 304 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 TCEA2Q15560 299 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 SPANXN4Q5MJ08 99 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 AAGABQ6PD74 315 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 DHDDSQ86SQ9 333 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CROCCP3Q8IVE0 287 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 DEFB119Q8N690 84 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 AVL9Q8NBF6 648 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 OR4E2Q8NGC2 313 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CLHC1Q8NHS4 586 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 DNASE2BQ8WZ79 361 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 DUSP15Q9H1R2 295 aaPredicted RBP16.18■□□□□ 0.18
COPS3-212ENST00000539941 TM9SF3Q9HD45 589 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CPNE7Q9UBL6 633 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 CD300AQ9UGN4 299 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 ARHGEF17Q96PE2 2063 aaPredicted RBP16.17■□□□□ 0.18
COPS3-212ENST00000539941 HEATR5BQ9P2D3 2071 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 IGKV1-8A0A0C4DH67 115 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 TGFB1P01137 390 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ANXA4P09525 319 aaPredicted RBP16.17■□□□□ 0.18
COPS3-212ENST00000539941 S100A3P33764 101 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 HNRNPFP52597 415 aaKnown RBP16.17■□□□□ 0.18
COPS3-212ENST00000539941 PWP1Q13610 501 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 PLCL1Q15111 1095 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ELOCQ15369 112 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 SF1Q15637 639 aaKnown RBP16.17■□□□□ 0.18
COPS3-212ENST00000539941 MAPKAPK3Q16644 382 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ZNF542PQ5EBM4 170 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 PRRT3Q5FWE3 981 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 SLC2A7Q6PXP3 512 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ARMCX6Q7L4S7 300 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ADGRF3Q8IZF5 1079 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 EFCAB3Q8N7B9 438 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ANKRD53Q8N9V6 530 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 C1orf216Q8TAB5 229 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 ASB9Q96DX5 294 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 LRRC61Q9BV99 259 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 EBPLQ9BY08 206 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 MS4A8Q9BY19 250 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 RMND5AQ9H871 391 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 IL1RL2Q9HB29 575 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 SPHK1Q9NYA1 384 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 SNX7Q9UNH6 387 aa16.17■□□□□ 0.18
COPS3-212ENST00000539941 CEP192Q8TEP8 1941 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 PCDH7O60245 1069 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 CLEC3AO75596 197 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SORBS2O94875 1100 aaKnown RBP16.16■□□□□ 0.18
COPS3-212ENST00000539941 KCNH1O95259 989 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 FKBP9O95302 570 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 CD97P48960 835 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 NHLH1Q02575 133 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 ZNF763Q0D2J5 394 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 TCF15Q12870 199 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 TRAP1Q12931 704 aaKnown RBP16.16■□□□□ 0.18
COPS3-212ENST00000539941 WDR45BQ5MNZ6 344 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 DEPDC1Q5TB30 811 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 KHDRBS2Q5VWX1 349 aaKnown RBP16.16■□□□□ 0.18
COPS3-212ENST00000539941 DLEU7Q6UYE1 221 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 CCDC80Q76M96 950 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 ADCK2Q7Z695 626 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SLC9B2Q86UD5 537 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SLC15A3Q8IY34 581 aa16.16■□□□□ 0.18
COPS3-212ENST00000539941 SDR16C5Q8N3Y7 309 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms