RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DUSP21Q9H596 190 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 ACOT13Q9NPJ3 140 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 RNF6Q9Y252 685 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 PCDHGA6Q9Y5G7 932 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 CFAP20Q9Y6A4 193 aaKnown RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 M0R3G1 203 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 KPNA3O00505 521 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 SLCO2B1O94956 709 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 ADRA2AP08913 450 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 GRK5P34947 590 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 PTGER1P34995 402 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 CDH12P55289 794 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 DOC2BQ14184 412 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 CARTPTQ16568 116 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 KIAA1614Q5VZ46 1190 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 C12orf40Q86WS4 652 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 TRUB1Q8WWH5 349 aaKnown RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 IRF7Q92985 503 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 C11orf24Q96F05 449 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 CPEB1Q9BZB8 566 aaKnown RBP13.53□□□□□ -0.24
UBE3B-210ENST00000539599 CHST8Q9H2A9 424 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
UBE3B-210ENST00000539599 RGS10O43665 173 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 MOSPD3O75425 235 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 GABARAPO95166 117 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 XPAP23025 273 aaPredicted RBP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 TRPC1P48995 793 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 AP1S2P56377 157 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 RGS21Q2M5E4 152 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 DSG4Q86SJ6 1040 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 SLC44A2Q8IWA5 706 aaPredicted RBP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 YIPF6Q96EC8 236 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 MRGPRX3Q96LB0 322 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 LRRC3BQ96PB8 259 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 HEPHQ9BQS7 1158 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 ZBP1Q9H171 429 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 ABCG4Q9H172 646 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 OR2AG1Q9H205 316 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 RUVBL1Q9Y265 456 aaKnown RBP13.52□□□□□ -0.24
UBE3B-210ENST00000539599 SH3GLB1Q9Y371 365 aa13.52□□□□□ -0.24
UBE3B-210ENST00000539599 RTCAO00442 366 aaKnown RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 SUV39H1O43463 412 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 CD36P16671 472 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 MVDP53602 400 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 ITGA1P56199 1179 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 TP53BP2Q13625 1128 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 LIPJQ5W064 366 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 METTL2BQ6P1Q9 378 aaKnown RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 KLHL17Q6TDP4 642 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 PARS2Q7L3T8 475 aaKnown RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 OLIG3Q7RTU3 272 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 TRAPPC5Q8IUR0 188 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 UTP15Q8TED0 518 aaKnown RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 GTPBP3Q969Y2 492 aaKnown RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-210ENST00000539599 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 ROGDIQ9GZN7 287 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 GPR83Q9NYM4 423 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 NDUFAF4Q9P032 175 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 RPS6KA6Q9UK32 745 aa13.52□□□□□ -0.25
UBE3B-210ENST00000539599 ADAM23O75077 832 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 JRKO75564 520 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 STATHP02808 62 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 ELFN1P0C7U0 828 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SOAT1P35610 550 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 BCAP31P51572 246 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 RELAQ04206 551 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 TOP3AQ13472 1001 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-210ENST00000539599 RPS26P11Q5JNZ5 115 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-210ENST00000539599 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 GALNT13Q8IUC8 556 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 BTN2A2Q8WVV5 523 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 GLYATL1Q969I3 302 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 TAMM41Q96BW9 452 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 FCRL1Q96LA6 429 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 ASPSCR1Q9BZE9 553 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SPHK2Q9NRA0 654 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SACM1LQ9NTJ5 587 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 PRUNE2Q8WUY3 3088 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 WASH3PC4AMC7 463 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms