RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SNX4O95219 450 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CSTBP04080 98 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 JUNP05412 331 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CD72P21854 359 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 STC1P52823 247 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TMBIM1Q969X1 311 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ALPK1Q96QP1 1244 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR52B2Q96RD2 323 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GFM1Q96RP9 751 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 B3GNT4Q9C0J1 378 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TAS2R9Q9NYW1 312 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 STOX2Q9P2F5 926 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PRSS51A0A1B0GVH4 220 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TPD52L2O43399 206 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GSRP00390 522 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GADD45AP24522 165 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 MAPK3P27361 379 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC6A6P31641 620 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 BDKRB1P46663 353 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 KLF1Q13351 362 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PCLAFQ15004 111 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 LRIF1Q5T3J3 769 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 KIAA1161Q6NSJ0 714 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 RPL13AP3Q6NVV1 102 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 AGTRAPQ6RW13 159 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC36A4Q6YBV0 504 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR4C15Q8NGM1 316 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 RHEBL1Q8TAI7 183 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC25A36Q96CQ1 311 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TBX5Q99593 518 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC17A6Q9P2U8 582 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PSMD9O00233 223 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DFNA5O60443 496 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CFHP08603 1231 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC2A2P11168 524 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SYT16Q17RD7 645 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TXNDC8Q6A555 127 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GID4Q8IVV7 300 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR4E2Q8NGC2 313 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR4K14Q8NGD5 310 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 THEM6Q8WUY1 208 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TTYH1Q9H313 450 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF358Q9NW07 568 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 COL2A1P02458 1487 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SH3PXD2BA1X283 911 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PPEF2O14830 753 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PRH1P02810 166 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 HSD3B1P14060 373 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 HSD3B2P26439 372 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GRIA1P42261 906 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SEC23BQ15437 767 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GFOD2Q3B7J2 385 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 RUNDC3AQ59EK9 446 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CLEC12AQ5QGZ9 265 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 EIF5AL1Q6IS14 154 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 YIPF7Q8N8F6 280 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR5AK3PQ8NH89 298 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CANT1Q8WVQ1 401 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR5P2Q8WZ92 322 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZFP3Q96NJ6 502 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PKP4Q99569 1192 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SMOQ99835 787 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 G6PC3Q9BUM1 346 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DPAGT1Q9H3H5 408 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CACNG4Q9UBN1 327 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 EXOSC1Q9Y3B2 195 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 A0A0G2JN53 185 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SCAMP1O15126 338 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CLPXO76031 633 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 IFNA21P01568 189 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 MTHFD1P11586 935 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DHPSP49366 369 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TRAM2Q15035 370 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TPRG1LQ5T0D9 272 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TXNRD3NBQ6F5E7 133 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF627Q7L945 461 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TRAM1L1Q8N609 369 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 FAM86B1Q8N7N1 296 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CEP76Q8TAP6 659 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF382Q96SR6 550 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 RNF39Q9H2S5 420 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 C10orf71Q711Q0 1435 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GSK3BP49841 420 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DGKQP52824 942 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 RHDQ02161 417 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CHAF1BQ13112 559 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 KIAA1614Q5VZ46 1190 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GHDCQ8N2G8 530 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF615Q8N8J6 731 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PHOSPHO1Q8TCT1 267 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms