RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDH5-202ENST00000539168 PYDC1Q8WXC3 89 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 POP5Q969H6 163 aaKnown RBP19.46■□□□□ 0.71
CDH5-202ENST00000539168 ECSITQ9BQ95 431 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 DPH7Q9BTV6 452 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 EFHD1Q9BUP0 239 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 REXO4Q9GZR2 422 aaKnown RBP19.46■□□□□ 0.71
CDH5-202ENST00000539168 VCX3BQ9H321 246 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 SLC6A20Q9NP91 592 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 C6orf203Q9P0P8 240 aaPredicted RBP19.46■□□□□ 0.71
CDH5-202ENST00000539168 SNX13Q9Y5W8 968 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 AP1M2Q9Y6Q5 423 aa19.46■□□□□ 0.71
CDH5-202ENST00000539168 K7ESF4 209 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 CAPN5O15484 640 aaPredicted RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 SH3BGRLO75368 114 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 GMNNO75496 209 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 PEBP1P30086 187 aaKnown RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 PXNP49023 591 aaPredicted RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 RPS15AP62244 130 aaKnown RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 TRA2BP62995 288 aaKnown RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 YBX1P67809 324 aaKnown RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 RELAQ04206 551 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 FXNQ16595 210 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 HKDC1Q2TB90 917 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 RABL3Q5HYI8 236 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 WDR45BQ5MNZ6 344 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 TMEM126BQ8IUX1 230 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 MFSD9Q8NBP5 474 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 CDC26Q8NHZ8 85 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 C16orf78Q8WTQ4 265 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 NRTNQ99748 197 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 PAIP1Q9H074 479 aaKnown RBP19.45■□□□□ 0.7
CDH5-202ENST00000539168 PCDHAC1Q9H158 963 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 SERHLQ9NQF3 203 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 SPHK1Q9NYA1 384 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 VAPAQ9P0L0 249 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 SPASTQ9UBP0 616 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 MAGEL2Q9UJ55 1249 aa19.45■□□□□ 0.7
CDH5-202ENST00000539168 FANCMQ8IYD8 2048 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 TRBV5-3A0A0A0MS03 114 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 PRAMEF33A0A0G2JMD5 474 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 FEZF1A0PJY2 475 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 NDUFS4O43181 175 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 BAG2O95816 211 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 KLK1P06870 262 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 MSX2P35548 267 aaPredicted RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 TSFMP43897 325 aaKnown RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 PHC1P78364 1004 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 CYP4F3Q08477 520 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 GPR18Q14330 331 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 CCNYL2Q5T2Q4 361 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 OR4F3Q6IEY1 312 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 LRRC74BQ6ZQY2 392 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 ZDHHC1Q8WTX9 485 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 DNASE2BQ8WZ79 361 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 GFM2Q969S9 779 aaKnown RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 THAP11Q96EK4 314 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 THUMPD3Q9BV44 507 aaKnown RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 DUSP15Q9H1R2 295 aaPredicted RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 TCEAL2Q9H3H9 227 aaPredicted RBP19.44■□□□□ 0.7
CDH5-202ENST00000539168 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 PCDHB3Q9Y5E6 796 aa19.44■□□□□ 0.7
CDH5-202ENST00000539168 TCRBV3S1A0A5B6 114 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 GABRR3A8MPY1 467 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 C2orf74A8MZ97 194 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 BTN3A3O00478 584 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 RNASET2O00584 256 aaKnown RBP19.43■□□□□ 0.7
CDH5-202ENST00000539168 PLPP1O14494 284 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 ZW10O43264 779 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 TNFSF14O43557 240 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 DFNA5O60443 496 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 TBX19O60806 448 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 PPIBP23284 216 aaKnown RBP19.43■□□□□ 0.7
CDH5-202ENST00000539168 TGM3Q08188 693 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 PDE7AQ13946 482 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 ZIC1Q15915 447 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 SLC5A12Q1EHB4 618 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 MTX3Q5HYI7 312 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 FAM71E1Q6IPT2 247 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 OR7A2PQ8NGA2 310 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 WDR48Q8TAF3 677 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 CREB3L4Q8TEY5 395 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 ZNF764Q96H86 408 aaPredicted RBP19.43■□□□□ 0.7
CDH5-202ENST00000539168 HSPA12BQ96MM6 686 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 CCDC115Q96NT0 180 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 PANX1Q96RD7 426 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 LRRC61Q9BV99 259 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 TRBV23OR9-2A0A075B6M9 112 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 EVPLLA8MZ36 301 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 WNT1P04628 370 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 DCNP07585 359 aaKnown RBP19.43■□□□□ 0.7
CDH5-202ENST00000539168 ZCCHC18P0CG32 403 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 UMPSP11172 480 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 SESN3P58005 492 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 HNRNPKP61978 463 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH5-202ENST00000539168 CYP4F2P78329 520 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 MRPS22P82650 360 aaKnown RBP19.43■□□□□ 0.7
CDH5-202ENST00000539168 C2orf80Q0P641 193 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 HEPACAMQ14CZ8 416 aa19.43■□□□□ 0.7
CDH5-202ENST00000539168 TCEA2Q15560 299 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms