RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 PTERQ96BW5 349 aa11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 PARVBQ9HBI1 364 aa11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 HRASLS2Q9NWW9 162 aa11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 SLC17A7Q9P2U7 560 aa11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 TDRKHQ9Y2W6 561 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 CFAP20Q9Y6A4 193 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-208ENST00000538933 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 PCDH17O14917 1159 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 TYROBPO43914 113 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 KERAO60938 352 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 GUCA1CO95843 209 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 IGHEP01854 428 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ANXA5P08758 320 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 MSL3P1P0C860 447 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 TPBGLP0DKB5 382 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 MTHFD1P11586 935 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 NDUFS1P28331 727 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 KCNK10P57789 538 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ASPHQ12797 758 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 OR4D1Q15615 310 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 RPE65Q16518 533 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ZNF658BQ4V348 819 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 VWA2Q5GFL6 755 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 TMTC4Q5T4D3 741 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 B3GNTL1Q67FW5 361 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 CYHR1Q6ZMK1 362 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 CDHR3Q6ZTQ4 885 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 PPP1R32Q7Z5V6 425 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 DCUN1D3Q8IWE4 304 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 CARFQ8N187 725 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 PHC3Q8NDX5 983 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 DNAJB14Q8TBM8 379 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ASB11Q8WXH4 323 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 DPH2Q9BQC3 489 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 HGH1Q9BTY7 390 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ACTR5Q9H9F9 607 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 ARL15Q9NXU5 204 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 TMCO1Q9UM00 188 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 OARD1Q9Y530 152 aa11.92□□□□□ -0.5
CLSTN3-208ENST00000538933 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 UBXN8O00124 270 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 PLIN3O60664 434 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 CNOT3O75175 753 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 PSIP1O75475 530 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 MATN4O95460 622 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 PROCP04070 461 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 CPA3P15088 417 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 CHN1P15882 459 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 ACADLP28330 430 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 KIR3DL1P43629 444 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 AP1S2P56377 157 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 FOXL2P58012 376 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 CDC16Q13042 620 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 PRKG2Q13237 762 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 TSTA3Q13630 321 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 ZNF169Q14929 603 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 FCRL6Q6DN72 434 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 RPUSD3Q6P087 351 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 SLC22A9Q8IVM8 553 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 TBC1D21Q8IYX1 336 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 TCAIMQ8N3R3 496 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 OR5AR1Q8NGP9 310 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 OR5K2Q8NHB8 316 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 ATL1Q8WXF7 558 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 RAD51AP1Q96B01 352 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 C14orf79Q96F83 325 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 GPR78Q96P69 363 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 C12orf65Q9H3J6 166 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 MVB12BQ9H7P6 319 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 INTS9Q9NV88 658 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 POLG2Q9UHN1 485 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 ADAMTS6Q9UKP5 1117 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 PADI2Q9Y2J8 665 aa11.91□□□□□ -0.5
CLSTN3-208ENST00000538933 WDR91A4D1P6 747 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 SLC9B1P1A6NJY1 282 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ZNF839A8K0R7 811 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ARHGEF33A8MVX0 844 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 GFYI3L273 518 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 PEX12O00623 359 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 C1orf105O95561 183 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 UMODP07911 640 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 CD1EP15812 388 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 SLC18A1P54219 525 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 CDSNQ15517 529 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 TGFBIQ15582 683 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 PHKG1Q16816 387 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 SBSNQ6UWP8 590 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ZYG11AQ6WRX3 759 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms