RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SH3BP5O60239 455 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
CD4-208ENST00000538827 CCDC22O60826 627 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 CTSVO60911 334 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 SEC22BO75396 215 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ETHE1O95571 254 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 CD59P13987 128 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 CD1CP29017 333 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 PIK3CBP42338 1070 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 SEPHS1P49903 392 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 STX1BP61266 288 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ZNF33BQ06732 778 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 UBAP2LQ14157 1087 aaKnown RBP13.52□□□□□ -0.25
CD4-208ENST00000538827 ZIC1Q15915 447 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 AP5B1Q2VPB7 878 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 Q6ZSR9 355 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 LARP4Q71RC2 724 aaKnown RBP eCLIP13.52□□□□□ -0.25
CD4-208ENST00000538827 RNF44Q7L0R7 432 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ASPGQ86U10 573 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 MTDHQ86UE4 582 aaKnown RBP13.52□□□□□ -0.25
CD4-208ENST00000538827 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 RERGQ96A58 199 aaPredicted RBP13.52□□□□□ -0.25
CD4-208ENST00000538827 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ERP27Q96DN0 273 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 CMTM7Q96FZ5 175 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 APIPQ96GX9 242 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 SERPINI1Q99574 410 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 MS4A8Q9BY19 250 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 NMUR2Q9GZQ4 415 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 RHBGQ9H310 441 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 OR51B5Q9H339 312 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 IRAK4Q9NWZ3 460 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 C1orf109Q9NX04 203 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 EPHA6Q9UF33 1036 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 PCDHGA4Q9Y5G9 962 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 ASCC3Q8N3C0 2202 aaKnown RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 UNC13CQ8NB66 2214 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 FOXE1O00358 373 aaPredicted RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 MAP3K7O43318 606 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 PRR35P0CG20 571 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 CKMT2P17540 419 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 AHRP35869 848 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 ERVK-8P63133 956 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 RGS1Q08116 209 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 SLC14A1Q13336 389 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 SOWAHCQ53LP3 525 aaPredicted RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 C1orf52Q8N6N3 182 aaKnown RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 CDC26Q8NHZ8 85 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 N4BP2L2Q92802 583 aaPredicted RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 MACROD1Q9BQ69 325 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 SCNM1Q9BWG6 230 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 MRPL1Q9BYD6 325 aaKnown RBP13.51□□□□□ -0.25
CD4-208ENST00000538827 RAB33BQ9H082 229 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 MYLK2Q9H1R3 596 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 NMRK1Q9NWW6 199 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 ARMCX1Q9P291 453 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 TSC22D4Q9Y3Q8 395 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 CCL27Q9Y4X3 112 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 AP1M2Q9Y6Q5 423 aa13.51□□□□□ -0.25
CD4-208ENST00000538827 LAMA1P25391 3075 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 IGHV5-51A0A0C4DH38 117 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 A0A1W2PQM1 296 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 AGRPO00253 132 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 P2RX6O15547 441 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 CLEC3AO75596 197 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 MYO1DO94832 1006 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 ZBTB11O95625 1053 aaPredicted RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 CPNE6O95741 557 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 C9P02748 559 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 SERPINA6P08185 405 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 SLC35G6P0C7Q6 338 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 CEACAM1P13688 526 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 GSTM2P28161 218 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 MAPK1P28482 360 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 NME5P56597 212 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 VSX2P58304 361 aaPredicted RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 CFHR1Q03591 330 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 ACSM2AQ08AH3 577 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 MAD2L1Q13257 205 aaPredicted RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 SQLEQ14534 574 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 RPS6KA2Q15349 733 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 ZC3H12BQ5HYM0 836 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 KHDRBS2Q5VWX1 349 aaKnown RBP13.5□□□□□ -0.25
CD4-208ENST00000538827 ACSM2BQ68CK6 577 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 FRMPD2BQ6IN97 320 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 OGFOD2Q6N063 350 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 PRSS42Q7Z5A4 293 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 CAMKVQ8NCB2 501 aa13.5□□□□□ -0.25
CD4-208ENST00000538827 TRPV3Q8NET8 790 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms