RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF227Q86WZ6 799 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 LGI4Q8N135 537 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 PRELID2Q8N945 189 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 CAMKVQ8NCB2 501 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 ASB11Q8WXH4 323 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 HES6Q96HZ4 224 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 TCF12Q99081 682 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 ZNF559Q9BR84 538 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 CCDC177Q9NQR7 707 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 LANCL2Q9NS86 450 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 TNFRSF10DQ9UBN6 386 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 ZNF407Q9C0G0 2248 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 KCNE1BA0A087WTH5 132 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 HS6ST1O60243 411 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 CD99P14209 185 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 CHRNB4P30926 498 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 DNAJA1P31689 397 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 NPY2RP49146 381 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 TERF1P54274 439 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 OLR1P78380 273 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 TTLL9Q3SXZ7 439 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 CENPUQ71F23 418 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 PCGF5Q86SE9 256 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 ASPGQ86U10 573 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 SLC26A11Q86WA9 606 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 FBXO15Q8NCQ5 510 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 FRMD8P1Q9BZ68 369 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 HRH3Q9Y5N1 445 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 PHF3Q92576 2039 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 ABCA4P78363 2273 aa13.13□□□□□ -0.31
SMARCA4-206ENST00000538456 FOXO6A8MYZ6 492 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 ZBTB14O43829 449 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 PDE9AO76083 593 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 FHP07954 510 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SLC35G6P0C7Q6 338 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 OGNP20774 298 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 HRH2P25021 359 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 MSX1P28360 303 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SKIV2L2P42285 1042 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 MLF1P58340 268 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 TFF3Q07654 80 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 MYBPHQ13203 477 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 CMPK2Q5EBM0 449 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 ZNF470Q6ECI4 717 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 CAPN13Q6MZZ7 669 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SULF2Q8IWU5 870 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 DMRTC2Q8IXT2 367 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 PLPP5Q8NEB5 264 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SLC13A3Q8WWT9 602 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 RND1Q92730 232 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 OR1F2PQ96R84 312 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 SOX13Q9UN79 622 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 KLF13Q9Y2Y9 288 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
SMARCA4-206ENST00000538456 CTAGE9A4FU28 777 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 GFYI3L273 518 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 NDUFS4O43181 175 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 PRMT3O60678 531 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 B4GALT2O60909 372 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 DNAJB6O75190 326 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 TOXO94900 526 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 B3GALT4O96024 378 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 MPC1LP0DKB6 136 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 CDH1P12830 882 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 HOXB4P17483 251 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 HLCSP50747 726 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 IST1P53990 364 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 GPR85P60893 370 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 KIF5AQ12840 1032 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 DEFB134Q4QY38 66 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 TMEM211Q6ICI0 200 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 MBOAT1Q6ZNC8 495 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 C17orf64Q86WR6 236 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 CPNE9Q8IYJ1 553 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms