RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
COPS7A-207ENST00000538375 PTCD3Q96EY7 689 aaKnown RBP12.54□□□□□ -0.4
COPS7A-207ENST00000538375 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
COPS7A-207ENST00000538375 DCDC2Q9UHG0 476 aa12.54□□□□□ -0.4
COPS7A-207ENST00000538375 TMCO1Q9UM00 188 aa12.54□□□□□ -0.4
COPS7A-207ENST00000538375 URADA6NGE7 173 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ARGFXA6NJG6 315 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PEX12O00623 359 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-207ENST00000538375 KLK8O60259 260 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 CDH16O75309 829 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ONECUT2O95948 504 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PRB1P04280 392 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 TUBBP07437 444 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 FAM87AP0C7U9 286 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PCNAP12004 261 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 EEF1DP29692 281 aaKnown RBP12.53□□□□□ -0.4
COPS7A-207ENST00000538375 RAB8AP61006 207 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 GTF2H2Q13888 395 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 LY6DQ14210 128 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 LINC00303Q3SY05 128 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 GTF2H2CQ6P1K8 395 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 PRSS41Q7RTY9 318 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 TMEM151BQ8IW70 566 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPS7A-207ENST00000538375 LSM14AQ8ND56 463 aaKnown RBP12.53□□□□□ -0.4
COPS7A-207ENST00000538375 NT5CQ8TCD5 201 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 UBTD2Q8WUN7 234 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 TTC9Q92623 222 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 EFCAB11Q9BUY7 163 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 SARGQ9BW04 601 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 NT5DC2Q9H857 520 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 IPPKQ9H8X2 491 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 WDR54Q9H977 334 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ACTR8Q9H981 624 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 HCN3Q9P1Z3 774 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ZNF490Q9ULM2 529 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-207ENST00000538375 NAALAD2Q9Y3Q0 740 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 AHCTF1Q8WYP5 2266 aa12.53□□□□□ -0.4
COPS7A-207ENST00000538375 ZNF860A6NHJ4 632 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 H0YIG0 161 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 KLHL18O94889 574 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 NSA2O95478 260 aaKnown RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 B3GALT4O96024 378 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 HEXBP07686 556 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 SERPINA6P08185 405 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ALOX12P18054 663 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 EPORP19235 508 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 CCT5P48643 541 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 CCL11P51671 97 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 SNRPNP63162 240 aaKnown RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 CHAF1BQ13112 559 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 DSG2Q14126 1118 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 HERC3Q15034 1050 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 DEFB134Q4QY38 66 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 MED27Q6P2C8 311 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 PCSK4Q6UW60 755 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 GOLGA7Q7Z5G4 137 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 LCA5Q86VQ0 697 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ARHGEF39Q8N4T4 335 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 TTLQ8NG68 377 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 OR51Q1Q8NH59 317 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 PPP4R1Q8TF05 950 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 UBE2E3Q969T4 207 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 FAR2Q96K12 515 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 CRB3Q9BUF7 120 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 SLC26A1Q9H2B4 701 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 KLHL31Q9H511 634 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 NOL11Q9H8H0 719 aaKnown RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ACSS2Q9NR19 701 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 NXT1Q9UKK6 140 aaKnown RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 RAB21Q9UL25 225 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 PLAAQ9Y263 795 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 MAP4K5Q9Y4K4 846 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 SLC22A7Q9Y694 548 aa12.52□□□□□ -0.41
COPS7A-207ENST00000538375 ASH1LQ9NR48 2969 aaKnown RBP12.52□□□□□ -0.41
COPS7A-207ENST00000538375 HEATR5BQ9P2D3 2071 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 A0A0G2JN53 185 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 VSTM2BA6NLU5 285 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 STX16-NPEPL1H3BU86 382 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 E2F3O00716 465 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 STX16O14662 325 aa12.51□□□□□ -0.41
COPS7A-207ENST00000538375 GLRA3O75311 464 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms