RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TM9SF3Q9HD45 589 aa15.04■□□□□ -0
MKS1-204ENST00000537529 IL1RAPQ9NPH3 570 aa15.04■□□□□ -0
MKS1-204ENST00000537529 FAM118AQ9NWS6 357 aa15.04■□□□□ -0
MKS1-204ENST00000537529 SPATA7Q9P0W8 599 aa15.04■□□□□ -0
MKS1-204ENST00000537529 C3orf18Q9UK00 162 aa15.04■□□□□ -0
MKS1-204ENST00000537529 BAG5Q9UL15 447 aa15.04■□□□□ -0
MKS1-204ENST00000537529 EXO1Q9UQ84 846 aaKnown RBP15.04■□□□□ -0
MKS1-204ENST00000537529 HS6ST1O60243 411 aa15.04■□□□□ -0
MKS1-204ENST00000537529 NOBOXO60393 691 aa15.04■□□□□ -0
MKS1-204ENST00000537529 SEMG1P04279 462 aa15.04■□□□□ -0
MKS1-204ENST00000537529 FABP3P05413 133 aa15.04■□□□□ -0
MKS1-204ENST00000537529 ABCB1P08183 1280 aaPredicted RBP15.04■□□□□ -0
MKS1-204ENST00000537529 FURINP09958 794 aa15.04■□□□□ -0
MKS1-204ENST00000537529 SLC35G4P0C7Q5 338 aa15.04■□□□□ -0
MKS1-204ENST00000537529 GDI1P31150 447 aa15.04■□□□□ -0
MKS1-204ENST00000537529 SHMT2P34897 504 aa15.04■□□□□ -0
MKS1-204ENST00000537529 PCGF2P35227 344 aa15.04■□□□□ -0
MKS1-204ENST00000537529 RAD23AP54725 363 aa15.04■□□□□ -0
MKS1-204ENST00000537529 C2orf80Q0P641 193 aa15.04■□□□□ -0
MKS1-204ENST00000537529 RGNQ15493 299 aa15.04■□□□□ -0
MKS1-204ENST00000537529 ZNF385BQ569K4 471 aa15.04■□□□□ -0
MKS1-204ENST00000537529 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
MKS1-204ENST00000537529 OR2T5Q6IEZ7 315 aa15.04■□□□□ -0
MKS1-204ENST00000537529 IKBIPQ70UQ0 350 aa15.04■□□□□ -0
MKS1-204ENST00000537529 CBLL1Q75N03 491 aa15.04■□□□□ -0
MKS1-204ENST00000537529 LPCAT2Q7L5N7 544 aa15.04■□□□□ -0
MKS1-204ENST00000537529 TMEM179BQ7Z7N9 219 aa15.04■□□□□ -0
MKS1-204ENST00000537529 ZNF513Q8N8E2 541 aaPredicted RBP15.04■□□□□ -0
MKS1-204ENST00000537529 OR10Q1Q8NGQ4 319 aa15.04■□□□□ -0
MKS1-204ENST00000537529 OR2T29Q8NH02 315 aa15.04■□□□□ -0
MKS1-204ENST00000537529 GOT1L1Q8NHS2 421 aaPredicted RBP15.04■□□□□ -0
MKS1-204ENST00000537529 TMIGD2Q96BF3 282 aa15.04■□□□□ -0
MKS1-204ENST00000537529 ELSPBP1Q96BH3 223 aa15.04■□□□□ -0
MKS1-204ENST00000537529 MPP4Q96JB8 637 aa15.04■□□□□ -0
MKS1-204ENST00000537529 MYADMQ96S97 322 aa15.04■□□□□ -0
MKS1-204ENST00000537529 PCBD2Q9H0N5 130 aa15.04■□□□□ -0
MKS1-204ENST00000537529 GABARAPL1Q9H0R8 117 aa15.04■□□□□ -0
MKS1-204ENST00000537529 NKX2-4Q9H2Z4 354 aa15.04■□□□□ -0
MKS1-204ENST00000537529 TRIT1Q9H3H1 467 aaKnown RBP15.04■□□□□ -0
MKS1-204ENST00000537529 HLCSP50747 726 aa15.03■□□□□ -0
MKS1-204ENST00000537529 CDK9P50750 372 aaKnown RBP15.03■□□□□ -0
MKS1-204ENST00000537529 IRF4Q15306 451 aa15.03■□□□□ -0
MKS1-204ENST00000537529 ZBED5Q49AG3 693 aa15.03■□□□□ -0
MKS1-204ENST00000537529 ZNF776Q68DI1 518 aaPredicted RBP15.03■□□□□ -0
MKS1-204ENST00000537529 FAM71E1Q6IPT2 247 aa15.03■□□□□ -0
MKS1-204ENST00000537529 ANKRD54Q6NXT1 300 aa15.03■□□□□ -0
MKS1-204ENST00000537529 SYCE2Q6PIF2 218 aa15.03■□□□□ -0
MKS1-204ENST00000537529 FAM129CQ86XR2 697 aa15.03■□□□□ -0
MKS1-204ENST00000537529 C2orf73Q8N5S3 287 aaPredicted RBP15.03■□□□□ -0
MKS1-204ENST00000537529 ARL10Q8N8L6 244 aa15.03■□□□□ -0
MKS1-204ENST00000537529 ZNF740Q8NDX6 193 aa15.03■□□□□ -0
MKS1-204ENST00000537529 HSH2DQ96JZ2 352 aa15.03■□□□□ -0
MKS1-204ENST00000537529 PBX4Q9BYU1 374 aa15.03■□□□□ -0
MKS1-204ENST00000537529 AHSPQ9NZD4 102 aa15.03■□□□□ -0
MKS1-204ENST00000537529 GBAP04062 536 aa15.02■□□□□ -0
MKS1-204ENST00000537529 KLK1P06870 262 aa15.02■□□□□ -0
MKS1-204ENST00000537529 CXCR2P25025 360 aa15.02■□□□□ -0
MKS1-204ENST00000537529 ARHGDIAP52565 204 aa15.02■□□□□ -0
MKS1-204ENST00000537529 TAS2R50P59544 299 aa15.02■□□□□ -0
MKS1-204ENST00000537529 TEAD4Q15561 434 aa15.02■□□□□ -0
MKS1-204ENST00000537529 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.02■□□□□ -0
MKS1-204ENST00000537529 TMEM184AQ6ZMB5 413 aa15.02■□□□□ -0
MKS1-204ENST00000537529 VN1R5Q7Z5H4 357 aa15.02■□□□□ -0
MKS1-204ENST00000537529 HORMAD1Q86X24 394 aa15.02■□□□□ -0
MKS1-204ENST00000537529 C11orf65Q8NCR3 313 aa15.02■□□□□ -0
MKS1-204ENST00000537529 SMPDL3AQ92484 453 aa15.02■□□□□ -0
MKS1-204ENST00000537529 AIF1LQ9BQI0 150 aa15.02■□□□□ -0
MKS1-204ENST00000537529 ACAT2Q9BWD1 397 aa15.02■□□□□ -0
MKS1-204ENST00000537529 MBNL1Q9NR56 388 aaKnown RBP15.02■□□□□ -0
MKS1-204ENST00000537529 PHPT1Q9NRX4 125 aaPredicted RBP15.02■□□□□ -0
MKS1-204ENST00000537529 TM7SF3Q9NS93 570 aa15.02■□□□□ -0
MKS1-204ENST00000537529 DDX18Q9NVP1 670 aaKnown RBP15.02■□□□□ -0
MKS1-204ENST00000537529 SPASTQ9UBP0 616 aa15.02■□□□□ -0
MKS1-204ENST00000537529 TAC3Q9UHF0 121 aa15.02■□□□□ -0
MKS1-204ENST00000537529 ACSL5Q9ULC5 683 aa15.02■□□□□ -0
MKS1-204ENST00000537529 FAF1Q9UNN5 650 aaPredicted RBP15.02■□□□□ -0
MKS1-204ENST00000537529 ABCG2Q9UNQ0 655 aa15.02■□□□□ -0
MKS1-204ENST00000537529 A0A1W2PP55 124 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 GPR37L1O60883 481 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 FKBP9O95302 570 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 SERPINB1P30740 379 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 KCNAB2Q13303 367 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 ZC3H12BQ5HYM0 836 aaKnown RBP15.02□□□□□ -0.01
MKS1-204ENST00000537529 RBM48Q5RL73 367 aaKnown RBP15.02□□□□□ -0.01
MKS1-204ENST00000537529 GALNT10Q86SR1 603 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 RAB42Q8N4Z0 105 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 OR4K1Q8NGD4 311 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 NPLQ9BXD5 320 aaPredicted RBP15.02□□□□□ -0.01
MKS1-204ENST00000537529 AMBRA1Q9C0C7 1298 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 MCOLN1Q9GZU1 580 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 WASH6PQ9NQA3 447 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 ADPRHL2Q9NX46 363 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 VNN3Q9NY84 501 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 SERGEFQ9UGK8 458 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 U3KQV3 271 aa15.02□□□□□ -0.01
MKS1-204ENST00000537529 EPOPA6NHQ4 379 aa15.01□□□□□ -0.01
MKS1-204ENST00000537529 LINC01565O15544 149 aa15.01□□□□□ -0.01
MKS1-204ENST00000537529 SEMA3DO95025 777 aa15.01□□□□□ -0.01
MKS1-204ENST00000537529 C6orf47O95873 294 aa15.01□□□□□ -0.01
MKS1-204ENST00000537529 NTRK1P04629 796 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms