RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HKDC1Q2TB90 917 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 PRTGQ2VWP7 1150 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 FOXR1Q6PIV2 292 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 MARCH9Q86YJ5 346 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 CCT6BQ92526 530 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 CMTM7Q96FZ5 175 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 SLC6A16Q9GZN6 736 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 SPRTNQ9H040 489 aaPredicted RBP23.12■■□□□ 1.29
HMGA2-208ENST00000537429 STARD5Q9NSY2 213 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 ADAM21Q9UKJ8 722 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 PTPRBP23467 1997 aa23.12■■□□□ 1.29
HMGA2-208ENST00000537429 KIF26BQ2KJY2 2108 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 A0A1W2PNU3 283 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 FITM1A5D6W6 292 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 LRIT2A6NDA9 550 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 PIP5K1BO14986 540 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 OR2B3O76000 313 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 JUNP05412 331 aaKnown RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 ITGA1P56199 1179 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 GNGT1P63211 74 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 RGS1Q08116 209 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 CSTF3Q12996 717 aaKnown RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 IL11RAQ14626 422 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 ADPRMQ3LIE5 342 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 CYB5D1Q6P9G0 228 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 BPHLQ86WA6 291 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 LRRC34Q8IZ02 419 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 ZNF655Q8N720 491 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 GBP7Q8N8V2 638 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 KCT2Q8NC54 265 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 OR8K5Q8NH50 307 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 AICDAQ9GZX7 198 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 APMAPQ9HDC9 416 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 VTI1BQ9UEU0 232 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 RARRES3Q9UL19 164 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 RUVBL1Q9Y265 456 aaKnown RBP23.11■■□□□ 1.29
HMGA2-208ENST00000537429 PTGDR2Q9Y5Y4 395 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 KNTC1P50748 2209 aa23.11■■□□□ 1.29
HMGA2-208ENST00000537429 WDFY3Q8IZQ1 3526 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 HDAC3O15379 428 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ZSCAN9O15535 394 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-208ENST00000537429 SKAP2O75563 359 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ETHE1O95571 254 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 JMJD7P0C870 316 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 FGF5P12034 268 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ITIH1P19827 911 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 PTX3P26022 381 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-208ENST00000537429 BTKQ06187 659 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 PDCD2Q16342 344 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-208ENST00000537429 TUBB8Q3ZCM7 444 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 DEPDC1Q5TB30 811 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 WDR75Q8IWA0 830 aaKnown RBP23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ARHGEF39Q8N4T4 335 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 CCT7Q99832 543 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 NLNQ9BYT8 704 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ACPTQ9BZG2 426 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 FGFR1OP2Q9NVK5 253 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 CCL27Q9Y4X3 112 aa23.1■■□□□ 1.29
HMGA2-208ENST00000537429 ZNF195O14628 629 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 PLD2O14939 933 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 POLR1CO15160 346 aaPredicted RBP23.09■■□□□ 1.29
HMGA2-208ENST00000537429 LINC00032P0C843 101 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 HNRNPH1P31943 449 aaKnown RBP23.09■■□□□ 1.29
HMGA2-208ENST00000537429 CUL3Q13618 768 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 C3orf38Q5JPI3 329 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 Q6ZSR9 355 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 DGLUCYQ7Z3D6 616 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 DDIASQ8IXT1 998 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 GPR135Q8IZ08 494 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 WDR36Q8NI36 951 aaKnown RBP23.09■■□□□ 1.29
HMGA2-208ENST00000537429 CHMP6Q96FZ7 201 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 OR51B5Q9H339 312 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 KLHL31Q9H511 634 aa23.09■■□□□ 1.29
HMGA2-208ENST00000537429 SLC28A1O00337 649 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 TGDSO95455 350 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 HOXD11P31277 338 aaPredicted RBP23.08■■□□□ 1.29
HMGA2-208ENST00000537429 ETV5P41161 510 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 EMP3P54852 163 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 STXBP1P61764 594 aaKnown RBP23.08■■□□□ 1.29
HMGA2-208ENST00000537429 HMGCS1Q01581 520 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 FOXC1Q12948 553 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 GRM7Q14831 915 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 XKR7Q5GH72 579 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 KHDRBS2Q5VWX1 349 aaKnown RBP23.08■■□□□ 1.29
HMGA2-208ENST00000537429 TMEM214Q6NUQ4 689 aaKnown RBP23.08■■□□□ 1.29
HMGA2-208ENST00000537429 TLDC1Q6P9B6 456 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 CHSY3Q70JA7 882 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 PPP1R3BQ86XI6 285 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 MS4A6EQ96DS6 147 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 C19orf60Q96EN9 201 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 C3orf30Q96M34 536 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 F2RL3Q96RI0 385 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 SERPINI1Q99574 410 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 NUF2Q9BZD4 464 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 REXO4Q9GZR2 422 aaKnown RBP23.08■■□□□ 1.29
HMGA2-208ENST00000537429 PFDN4Q9NQP4 134 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 SLC39A1Q9NY26 324 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 PISDQ9UG56 409 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 USH1CQ9Y6N9 552 aa23.08■■□□□ 1.29
HMGA2-208ENST00000537429 PMS2P1A4D2B8 440 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms