RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 C8orf33Q9H7E9 229 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 HCN3Q9P1Z3 774 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 AASSQ9UDR5 926 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 ZFR2Q9UPR6 939 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 NEMP2A6NFY4 417 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 A8MT66 165 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF197O14709 1029 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 GLAP06280 429 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 PPP1R8Q12972 351 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 INO80DQ53TQ3 878 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 WDTC1Q8N5D0 677 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 HEXDCQ8WVB3 486 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 TWIST2Q8WVJ9 160 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 SMG7Q92540 1137 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 HLA-CQ95604 372 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 ITCHQ96J02 903 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 CINPQ9BW66 212 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 SNTG1Q9NSN8 517 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 MPP6Q9NZW5 540 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 IKZF3Q9UKT9 509 aa10.53□□□□□ -0.72
CLSTN3-207ENST00000537408 RPS10-NUDT3A0A1W2PQS6 291 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SIGLEC6O43699 453 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ARL2P36404 184 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 CLDN20P56880 219 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 PSPHP78330 225 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 HOXC5Q00444 222 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TP53BP2Q13625 1128 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF124Q15973 351 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 GPRIN3Q6ZVF9 776 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF605Q86T29 641 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 LAX1Q8IWV1 398 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ZZZ3Q8IYH5 903 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 POF1BQ8WVV4 589 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TSPAN17Q96FV3 270 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SORCS2Q96PQ0 1159 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 P2RY13Q9BPV8 354 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 AGO1Q9UL18 857 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ASB4Q9Y574 426 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 CACNA1GO43497 2377 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 A0A0B4J293 547 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TARM1B6A8C7 271 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 HAS3O00219 553 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 E2F3O00716 465 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 AZIN1O14977 448 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 PMPCBO75439 489 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MOCS2O96007 188 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 CSF3P09919 207 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 CHMP24386 653 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 RORAP35398 523 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM151AQ8N4L1 468 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SLC13A3Q8WWT9 602 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 RNF31Q96EP0 1072 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 RADILQ96JH8 1075 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SNRNP25Q9BV90 132 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SIK2Q9H0K1 926 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 GALNT9Q9HCQ5 603 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 SPASTQ9UBP0 616 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 A0A0U1RQS6 177 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 WASH4PA8MWX3 477 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 PIP5K1BO14986 540 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 PLOD3O60568 738 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 LALBAP00709 142 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 C1RP00736 705 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 NFICP08651 508 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MAPK1P28482 360 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MICAQ29983 383 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 LRRC66Q68CR7 880 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF57Q68EA5 555 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 OVOS1Q6IE37 1185 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 ENPP6Q6UWR7 440 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM135Q86UB9 458 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 OR6C4Q8NGE1 309 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 OR6S1Q8NH40 331 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 OR52N1Q8NH53 320 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 AP3S1Q92572 193 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 C10orf90Q96M02 699 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 COQ10AQ96MF6 247 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 APOL2Q9BQE5 337 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TTPALQ9BTX7 342 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 THUMPD3Q9BV44 507 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TTYH1Q9H313 450 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MID1IP1Q9NPA3 183 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 DERAQ9Y315 318 aa10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 MRPS23Q9Y3D9 190 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-207ENST00000537408 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 LYRM1O43325 122 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 APOC3P02656 99 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 ATP12AP54707 1039 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 MED22Q15528 200 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TSTQ16762 297 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 SOWAHCQ53LP3 525 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms