RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 UCHL3P15374 230 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 CPOXP36551 454 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 GBE1Q04446 702 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 PAFAH1B3Q15102 231 aaKnown RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 XKR6Q5GH73 641 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 NSUN5P2Q63ZY6 315 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 IL20RBQ6UXL0 311 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF704Q6ZNC4 412 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 GLT6D1Q7Z4J2 308 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 MCOLN2Q8IZK6 566 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF611Q8N823 705 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 SEMA6DQ8NFY4 1073 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 OR2L3Q8NG85 312 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 SREK1Q8WXA9 508 aaKnown RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 SMARCE1Q969G3 411 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 SLC22A18Q96BI1 424 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 HSPBAP1Q96EW2 488 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 TRIB1Q96RU8 372 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 FAM173AQ9BQD7 235 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 STK33Q9BYT3 514 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 LANCL2Q9NS86 450 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF226Q9NYT6 803 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF223Q9UK11 482 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 CFAP45Q9UL16 551 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ERVK-11Q9UQG0 969 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 PKP3Q9Y446 797 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 PCDHGB1Q9Y5G3 927 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ARL5AQ9Y689 179 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 A0A1W2PPV9 198 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 TMEM191CA6NGB0 347 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 CCL22O00626 93 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 HS3ST1O14792 307 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 TMCC2O75069 709 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-217ENST00000537162 DESP17661 470 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 CNR1P21554 472 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 LOXL1Q08397 574 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-217ENST00000537162 PKP1Q13835 747 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 ZNF449Q6P9G9 518 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 GK5Q6ZS86 529 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 CYP4X1Q8N118 509 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 CCNYQ8ND76 341 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 PLPP5Q8NEB5 264 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 OR2A1Q8NGT9 310 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 NEIL3Q8TAT5 605 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 SLC44A1Q8WWI5 657 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 GCDHQ92947 438 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-217ENST00000537162 TRMT61AQ96FX7 289 aaKnown RBP8.71□□□□□ -1.02
CPSF7-217ENST00000537162 SRPK1Q96SB4 655 aaKnown RBP8.71□□□□□ -1.02
CPSF7-217ENST00000537162 COPS8Q99627 209 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 DPH7Q9BTV6 452 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 MED18Q9BUE0 208 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 TRABDQ9H4I3 376 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 HAUS2Q9NVX0 235 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 CRLS1Q9UJA2 301 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 PRSS21Q9Y6M0 314 aa8.71□□□□□ -1.02
CPSF7-217ENST00000537162 IGLV3-16A0A075B6K0 115 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 IGKV1-8A0A0C4DH67 115 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 TRBV11-1A0A0K0K1C0 115 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 LOC285095A0A1B0GVY8 99 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SLC5A10A0PJK1 596 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 A8MUA0 341 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 A8MXE2 369 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 MAGEB17A8MXT2 336 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SGK494L7N484 410 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SSX4O60224 188 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 KIAA0513O60268 411 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 OR10H2O60403 315 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 NUDT7P0C024 238 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CCDC166P0CW27 439 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 RALBP11234 206 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 DPP4P27487 766 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SLCO1A2P46721 670 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SSR4P51571 173 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 MTTPP55157 894 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 IFI35P80217 286 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 TYRO3Q06418 890 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CRYZQ08257 329 aaKnown RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 HYAL2Q12891 473 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CCSMST1Q4G0I0 132 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CCDC122Q5T0U0 273 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 RNF187Q5TA31 235 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-217ENST00000537162 GARNL3Q5VVW2 1013 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 SLC26A11Q86WA9 606 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 VRK3Q8IV63 474 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 APCDD1LQ8NCL9 501 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 OR10H5Q8NGA6 315 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 OR4K2Q8NGD2 314 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 OR2A5Q96R48 311 aa8.7□□□□□ -1.02
CPSF7-217ENST00000537162 TIMP4Q99727 224 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms