RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 A0A087WUV0 522 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 CCDC162PA2VCL2 907 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 TEX28O15482 410 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 ZBTB14O43829 449 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 VEGFDO43915 354 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 PRSS56P0CW18 603 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 RPL35AP18077 110 aaKnown RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 ELAVL4P26378 380 aaKnown RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 CHRNB4P30926 498 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 SRD5A2P31213 254 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 UCP2P55851 309 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 DCDC1P59894 354 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 GALK2Q01415 458 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 SLC3A1Q07837 685 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 LCP2Q13094 533 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 HNRNPDQ14103 355 aaKnown RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 PTPN14Q15678 1187 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 CCDC92Q53HC0 331 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 RUSC1-AS1Q66K80 236 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 DHRS11Q6UWP2 260 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 C5orf24Q7Z6I8 188 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 FAM89BQ8N5H3 189 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 RNASE8Q8TDE3 154 aaKnown RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 MTIF3Q9H2K0 278 aaKnown RBP4.79□□□□□ -1.64
PRKDC-208ENST00000536710 ATP13A3Q9H7F0 1226 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 SDF2L1Q9HCN8 221 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 HACD3Q9P035 362 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 POLKQ9UBT6 870 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
PRKDC-208ENST00000536710 NPHP3Q7Z494 1330 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 IGHV4-4A0A075B6R2 117 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 C2orf92A0A1B0GVN3 265 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 IFITM10A6NMD0 228 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 M0R296 226 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 ZNF195O14628 629 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 CYTIPO60759 359 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 SEC24AO95486 1093 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 NADKO95544 446 aaPredicted RBP4.78□□□□□ -1.64
PRKDC-208ENST00000536710 MT-ND2P03891 347 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 RAF1P04049 648 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 TIMP3P35625 211 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 ZNF790Q6PG37 636 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 MACC1Q6ZN28 852 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 LACC1Q8IV20 430 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 OR8H1Q8NGG4 311 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 SEPT8Q92599 483 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 EPSTI1Q96J88 318 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 FSD1Q9BTV5 496 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 PNPLA3Q9NST1 481 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 FETUBQ9UGM5 382 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 FBXL4Q9UKA2 621 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 ELF5Q9UKW6 265 aaPredicted RBP4.78□□□□□ -1.64
PRKDC-208ENST00000536710 POMT2Q9UKY4 750 aa4.78□□□□□ -1.64
PRKDC-208ENST00000536710 TDRKHQ9Y2W6 561 aaKnown RBP4.78□□□□□ -1.64
PRKDC-208ENST00000536710 MTMR11A4FU01 709 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 GMNNO75496 209 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 AP2A2O94973 939 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 EZRP15311 586 aaKnown RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 FERP16591 822 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 SLC1A3P43003 542 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 YBEYP58557 167 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 CDH18Q13634 790 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 ITGA9Q13797 1035 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 SLC25A47Q6Q0C1 308 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 C17orf107Q6ZR85 190 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 RTL3Q8N8U3 475 aaKnown RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 GGHQ92820 318 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 ULK4Q96C45 1275 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 UBAC1Q9BSL1 405 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 TRIM7Q9C029 511 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 ZNF71Q9NQZ8 489 aaPredicted RBP4.77□□□□□ -1.65
PRKDC-208ENST00000536710 MAN2C1Q9NTJ4 1040 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 RNF186Q9NXI6 227 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 CYP39A1Q9NYL5 469 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 WWOXQ9NZC7 414 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 ZNF580Q9UK33 172 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 APPL1Q9UKG1 709 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 SATB2Q9UPW6 733 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 TCF19Q9Y242 345 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 WDR37Q9Y2I8 494 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 SELENOKQ9Y6D0 94 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 GPRASP1Q5JY77 1395 aa4.77□□□□□ -1.65
PRKDC-208ENST00000536710 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 HTATSF1O43719 755 aaKnown RBP4.76□□□□□ -1.65
PRKDC-208ENST00000536710 BCAS2O75934 225 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-208ENST00000536710 KRT33AO76009 404 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 UMODP07911 640 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 AADACP22760 399 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 TEAD2Q15562 447 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 STXBP2Q15833 593 aa4.76□□□□□ -1.65
PRKDC-208ENST00000536710 DUSP5Q16690 384 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms